Pseudomonas rhodesiae: HRH33_09995
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Entry
HRH33_09995 CDS
T07097
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx00061
Fatty acid biosynthesis
prx00071
Fatty acid degradation
prx01100
Metabolic pathways
prx01212
Fatty acid metabolism
prx02024
Quorum sensing
prx04146
Peroxisome
Module
prx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HRH33_09995
00071 Fatty acid degradation
HRH33_09995
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HRH33_09995
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRH33_09995
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
prx01004
]
HRH33_09995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prx04147
]
HRH33_09995
Enzymes [BR:
prx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HRH33_09995
Lipid biosynthesis proteins [BR:
prx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HRH33_09995
Exosome [BR:
prx04147
]
Exosomal proteins
Exosomal proteins of breast milk
HRH33_09995
Exosomal proteins of breast cancer cells
HRH33_09995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
DUF5397
Motif
Other DBs
NCBI-ProteinID:
QKJ72900
LinkDB
All DBs
Position
2186150..2187805
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AA seq
551 aa
AA seq
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MPVAVRLPLPVFFERETRHPHKTFLVQPLGGGEVQRLTWADAGQQARRAAQWLRERALPP
GSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAHVLTHSEAALVLVGKLDDW
PAMAPGVPHGVPTISLPLCPPGVFDFSWADLQACTPIEDDPTPDATALATIIYTSGTTGL
PKGVMHSFGALGFAATRGTQLFGLGEGDRLLSYLPLCHVAERMFVELAAIYTGQTVFFAE
SLDTFLTDLRRARPTALFGVPRIWSKFQLGVYAKVPPRRLDRLLRLPFIGPRIGRKVLAG
LGLDALRIALSGAAPVPEALLHWYRRLGLDVLEVYGMTESCGYSHVCRPGQQTIGWIGTP
CPDVEVRIDPDGEVQVRSEATMLGYFKDPDKTRETLTADGFLRTGDKGEQDADGRLRLTG
RLKEIFKTSKGKYVAPAPIENRLAEHARIEQVCVVGDGLAAPMGLCVLSQAAPSEARAAL
QGSLERWLQQTNATLDKHERLSRLVVVNGVWGVENGFLTPTLKIKRNVIEATYGAHLHAW
SERTEAIVWQD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgctgttcgtttgccgctaccggtgttcttcgagcgagaaacccgtcacccc
cacaagacgtttctggtgcagcccttgggcggcggcgaggtgcagcgccttacctgggcg
gacgcgggccagcaggcccgccgcgccgcccaatggctgcgtgagcgggcgttgcccccc
ggctcgcacattgccctgatttcgaaaaactgcgcccactggatcatcgccgatctggcg
atctggatggccgggcacgtttcggtgccgctgtaccccaatctcaccgctgattccgtc
gcccatgtgctgacccattccgaggcggcgctggtgctggtcggcaagctcgacgactgg
cccgccatggcgcctggcgtgccccacggcgtgccgaccatcagcctgccgttgtgcccg
cctggcgtgttcgatttcagttgggccgatctacaagcctgcacaccgattgaggacgat
ccgacgcccgatgccacggcgcttgcaaccatcatctacacctccggcaccaccggcctg
cctaaaggcgtgatgcacagcttcggcgccttggggttcgccgccacccgtggcacgcaa
ctgttcggcctgggggagggcgatcggttactgtcgtacctgccgctgtgccatgtggca
gagcggatgttcgtggaattggcggcgatctacaccgggcaaacggtatttttcgccgag
agcctcgacacatttctaaccgacctgcgccgggcgcggcccaccgctttgttcggcgta
ccgcggatctggagcaaattccaactgggtgtctacgccaaggtgccgccgcgccgcctg
gataggctattgcgcctgccgtttatcgggccgcgcataggccgcaaagtacttgccggc
ctggggctggacgcgctgcgcattgcgctgtccggggcggcgccagtgcccgaagctctg
ctgcactggtatcggcgcctcggactggatgtgctggaggtgtacgggatgaccgaaagt
tgcggctattcccacgtatgccgccccggccagcagaccatcggctggatcggcacccca
tgccccgacgtcgaggtgcgcatcgaccccgacggtgaagtgcaagtgcgcagcgaggcc
accatgctcggttacttcaaagacccggataaaacccgcgaaaccctcaccgccgacggc
ttcctgcgtaccggtgacaagggcgagcaggatgccgacgggcgcctgcgcctgaccgga
cggctcaaggaaatcttcaagaccagtaagggcaaatacgtcgcgccggcgcccatcgaa
aaccgcctggccgagcatgcacggatcgaacaggtgtgcgtggtcggcgatggcctggcg
gcgccgatgggcctgtgcgtgttgtcgcaagcggccccgagcgaagcgcgcgcggccttg
caaggcagccttgagcgttggttgcaacagaccaacgccacgctggataaacatgagcgc
ttgagccgattggtggtggtcaacggcgtatggggcgtggaaaacggctttctcacgccc
accctcaaaatcaagcgcaacgtgatcgaagcgacttacggcgcacatttgcacgcttgg
agcgagcgcaccgaagcgattgtgtggcaggattag
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