Pseudomonas rhodesiae: HRH33_13620
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Entry
HRH33_13620 CDS
T07097
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HRH33_13620 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prx02044
]
HRH33_13620 (tssK)
Secretion system [BR:
prx02044
]
Type VI secretion system
Imp/Vas secretion system core components
HRH33_13620 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QKJ73567
LinkDB
All DBs
Position
complement(2997482..2998828)
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AA seq
448 aa
AA seq
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MSSRNPVIWHEGLFVKPQHFQQQARAAEAAVHQRVHSLNDALYGFSELVLNTEYLSFGKV
AITQARGIMPDGSVFDIPHDLAPPAPLEIADSSAVNQIVYLVLPLRSNGALEVRWPDQYG
NSRYIARREEIRDTHSDDGDQVGMDLAVPNLQLMLERSDRSAFTGIALGRIKDKRPDGSL
VMDEHFYPTSLSLQAVPALHRYLGEVAGLMRERAKNLAQRIGSPGQSGVADVTDFNLLQT
LNRLFPLFQHLTRQRQVHPERLYLALAQACGELVTFTDEGHLPQEYPAYQHDNLRESFQL
LEHTLRRALGTVLQPRAVSLPIVVQQYGVRTAALNDKRLLDNAEFILAVRADLPAEALRQ
QLPRQIKISSAEGLEQLVSLQLPGIPLIPLPVAPRHLPFHAGFSYFELERHHPTWESLSN
GSGFGFHIAGEFPELELQFWAIRSEKDE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgcaaccccgtcatctggcatgaaggtttattcgtcaaaccccagcacttc
cagcaacaggcccgcgccgccgaagccgccgtgcatcagcgcgtacacagcctgaatgac
gccctctacggcttcagcgaactggtgttgaacaccgagtatttgagcttcggcaaggtc
gccattacccaggcccgcgggatcatgcccgacggcagtgtcttcgacattccccatgat
ttggcaccgcccgcacctttggaaatcgccgacagcagtgccgtcaaccagatcgtctac
ctggtgctgccgctgcgttccaacggcgccctcgaagtgcgttggcccgaccaatacggc
aatagccgctatatcgcccgccgcgaagagatccgcgatacccacagcgatgacggcgac
caggtgggcatggacctggccgtgcccaacctgcaactgatgctcgaacgcagcgaccgc
agcgcctttaccggcatcgccctgggcaggatcaaggacaagcgcccggacggcagcctg
gtgatggacgagcacttctaccccaccagcctgtccttgcaggccgtgccggccttgcac
cgctacctgggtgaagtggccggtttgatgcgcgagcgggccaagaacctggcccagcgc
atcggctcgccggggcagtcgggggtggccgatgtgaccgacttcaacctgctgcaaacc
ctcaaccgcttgtttccgctgttccagcatttaactcgtcaacgccaggtccatccggaa
cggctgtacctcgcactggcccaggcctgcggcgaactggtgacctttaccgatgaaggc
cacctgccccaggaatacccggcctaccagcacgacaacctgcgcgagtctttccagctt
ttggaacacaccctgcgccgtgccctgggcaccgtgctgcaaccgcgtgcagtgtcgctg
ccgatcgtggtgcagcaatacggcgtacgcaccgctgccttgaatgacaagcgcctgctg
gacaacgccgaattcatcctcgccgtgcgcgccgacttacccgcggaggctctgcgccag
caactgccccggcagatcaagatcagctctgccgaaggtttggaacaactggtcagtctg
caactgccgggcattccgttgatcccactgcccgtggcgccacgtcatctgccgttccat
gccggcttcagttacttcgaactcgagcgccatcaccccacctgggagagcctgagcaac
ggcagcgggttcggtttccacatcgccggcgaattcccggagctggagttgcagttctgg
gcgatcaggagtgagaaagatgagtga
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