Pseudomonas rhodesiae: HRH33_13805
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Entry
HRH33_13805 CDS
T07097
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HRH33_13805
09124 Replication and repair
03420 Nucleotide excision repair
HRH33_13805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prx03021
]
HRH33_13805
03036 Chromosome and associated proteins [BR:
prx03036
]
HRH33_13805
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_13805
Enzymes [BR:
prx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HRH33_13805
Transcription machinery [BR:
prx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HRH33_13805
Chromosome and associated proteins [BR:
prx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HRH33_13805
DNA repair and recombination proteins [BR:
prx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HRH33_13805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QKJ73601
LinkDB
All DBs
Position
3050069..3052327
Genome browser
AA seq
752 aa
AA seq
DB search
MSYSVAVRALCEFTAKVGDLDLRFTPSPSAQEGIVGHRTVASRRSPHYQNEVALEGEYQQ
LKVRGRADGYDPDSQRLEEVKTYRGDLDAQPANHRQLHWAQVKVYGWLMCQKLGLTEIDL
ALVYFDIVGECETLLNQRFQAHALEAFFNQQCALFLDWARREMDHREARDRAAQNLGFPH
ADFRPGQRVLAESVYKAVSTGRCLMAQAPTGIGKTIGTIFPLLKALAPQQLDKVFFLTAK
TPGRKLALDAAQVLFTRNPDLHVRVLELVARDKACEHLDKACHGESCPLAKGFYDRLPAA
RSAAAKLRLLDQRNLREVALAHNVCPYYLSQEMARWADLVVADYNYYFDFGAMLFGLAQL
NQWRAAVLVDEAHNLVERARGMYSASLDQYRLKTLRDEAPEALKKPLQRLNREWNALHKA
QVAPYQAYDARPDKMLSALNLCASAMGDYFNDHPEALAGDLQAFYFDALQFAKVAELFNE
HFIFDITKRSLGGKRSSSTLCLRNVVPAEFIRPRLTAARSSVLFSATLSPRHYYADLLGL
PADTAWVDVASPFKAEQLRVRIVDEISTRFVHREASVGPIVELIAQQFAQQPGNYLAFFS
SFDYLQQVAQRLAEQHPHIPLWQQSRGMAEAERQGFLDQFTEHSQGVGFAVLGGAFGEGI
DLPGARLIGAFIATLGLPQLNPVNEQMKRRMAAIFGSGYDYTYLYPGLQKVVQAAGRVIR
SQQDQGVVMLIDDRFGEARVRPLLPSWWAISS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
ttgagttacagcgtggcggtacgtgccttgtgtgagttcaccgccaaggtcggtgacctg
gacctgcgtttcaccccgtcgcccagcgcccaggaagggatcgtcggccaccgcaccgtg
gcgtcgcgccgcagcccgcattatcaaaacgaagtggccctggaaggcgagtaccagcag
ctcaaggtgcggggcagggcggacggctacgacccggacagccagcgcctggaagaggtc
aaaacctaccgcggcgacctcgacgcccaacccgccaaccaccgccaactgcactgggct
caagtcaaggtgtatggctggctgatgtgccagaaactggggctgacagagatcgatctg
gcgctggtctacttcgatatcgtcggcgagtgcgagaccctgctcaatcagcgcttccag
gcccacgccctggaagcgttcttcaatcagcaatgtgcgctgtttctggattgggctcgg
cgcgagatggatcaccgagaggcgcgcgaccgcgcggcgcagaaccttggcttcccccat
gccgactttcgccccggccagcgggttctggccgagtcggtgtacaaagccgtcagcacc
ggccggtgcctgatggcccaggcgcccaccggcattggcaagaccatcggcacgattttt
ccgctgctcaaggcgttggcgccgcagcagttggacaaggtgttctttctcacggccaaa
acccctgggcgcaagcttgctctggatgccgcccaggtgctgttcacccgcaacccggac
ttgcatgtgcgtgtgctggaactggtggcacgggacaaagcctgcgagcacttggacaaa
gcctgtcacggcgaatcctgccccttggccaaaggtttttacgaccgcttgcccgccgca
cgtagcgctgcggccaagctacggctgctcgaccagcgcaatctgcgtgaggtcgccctg
gcccacaacgtttgcccgtattacctgagccaggaaatggcgcgctgggctgacctggtc
gtagccgactacaactattatttcgacttcggcgccatgctgttcggcctcgcccagctc
aaccaatggcgcgccgcggtgctggtggacgaagctcataacctggtggagcgcgcgcgc
gggatgtacagcgccagccttgatcagtaccgcctcaagacgttgcgcgacgaggcgccc
gaggccctgaaaaagcctttgcagcgcctcaatcgcgagtggaacgcgttgcacaaggcg
caagtggcgccgtaccaggcttatgacgccaggcccgataaaatgctcagtgccttgaac
ctgtgcgcgagtgccatgggcgattacttcaacgatcaccccgaagccctggccggcgac
ctgcaagctttttactttgacgcgctgcaatttgccaaagtggccgagttattcaacgaa
cacttcatcttcgacatcactaaacgctccttgggcggcaagcgcagcagctcgaccctg
tgcctgcgcaatgtggtgcccgccgagttcatccgcccacgactgaccgctgcccgcagc
agcgtgttgttttccgccacgttaagcccgcgccattactacgccgacttgctgggcttg
cctgcggacacggcgtgggtggacgtggcgtcgccgttcaaggccgagcaattgcgggtg
cgcattgtcgatgagatctcgacccgattcgtgcatcgcgaggcgtcggtgggccccatc
gttgagttgatcgcccagcaattcgcgcaacaacccggtaactacctggcgtttttttcc
agcttcgattacctccaacaagtggcgcagcgcctggccgaacagcacccgcacatcccg
ctgtggcagcagtcacggggcatggccgaggctgagcgccagggctttctcgaccagttc
accgaacatagccaaggggtggggttcgccgtgctcggcggcgcgtttggcgagggtatc
gacttgcccggcgcgcgcttgatcggcgcatttatcgccaccctgggcctgccgcagctg
aacccggtcaatgaacagatgaagcggcgcatggccgcgattttcggttcaggctacgac
tacacctatctgtatccaggcctgcaaaaagtcgtgcaggcagccggcagggttatccgc
agccagcaggaccaaggcgtggtgatgttgatcgacgatcgtttcggtgaggcgcgggta
cggccgttgttgccgagctggtgggcaatttcgtcctga
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integrated database retrieval system
