Pseudomonas rhodesiae: HRH33_14945
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Entry
HRH33_14945 CDS
T07097
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRH33_14945 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_14945 (xth)
Enzymes [BR:
prx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HRH33_14945 (xth)
DNA repair and recombination proteins [BR:
prx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HRH33_14945 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QKJ73815
LinkDB
All DBs
Position
3310114..3310923
Genome browser
AA seq
269 aa
AA seq
DB search
MQSLKIATFNVNGIGARLPNLLQWLERERPDIVCLQELKAQDNAFPAKALEQAGYGSVHH
GQAAWNGVAILARDAEPLLIHRGLPGAEHDPQARYLEAAVLGVIVGCLYLPNGNPQPGPK
FDYKLQWFEQLIQHAQTLHSSEHPVVLAGDYNVVPTDLDIYNTRSWLKDALLQPESRACY
QKLLDQGWVDSLRHLYPDERVYTFWDYFRQHWQKNSGLRIDHLLLNPVLAPRLENAGVDA
WVRNEEHASDHAPVWVQISAKPRKRIQRT
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccctcaagatcgccacgttcaatgtcaatggcataggcgcacgcctgccgaac
ctgttgcagtggctggagcgagagcggcccgacattgtctgcctgcaggagctgaaagcg
caggacaacgccttccccgccaaggcgctggagcaagcaggttacggctctgtacaccat
ggccaggcggcgtggaacggagtcgccattctggcgcgcgatgccgagccgctgttgatc
catagagggttaccgggggccgaacatgatccccaggcccgttatctggaagcggcggtg
ctgggggtaatcgtcggctgcctgtacctgcccaacggcaaccctcagcctgggccgaag
ttcgattacaaactgcaatggttcgaacagttgattcaacacgctcaaaccttacacagc
agtgaacacccggtggtgctggctggagattacaacgtggtgcctaccgatctggatatc
tacaacacccgctcgtggctcaaggatgccctcctccagcccgagagccgcgcgtgctac
caaaagcttctggaccaaggctgggtcgactcgcttcggcacctgtatccagacgagcgc
gtatacacgttctgggattatttccgtcagcattggcagaaaaattctggtttgcgtatc
gatcatctattgctgaacccggtgttggccccacgccttgaaaacgccggcgtcgatgca
tgggtgcgcaacgaagaacatgccagcgaccatgcaccggtctgggttcaaatcagtgcc
aaaccgcgcaagcgtatccagcgtacttga
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