Pseudomonas rhodesiae: HRH33_15250
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Entry
HRH33_15250 CDS
T07097
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
prx
Pseudomonas rhodesiae
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_15250
DNA repair and recombination proteins [BR:
prx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HRH33_15250
Archaeal homologous recombinant proteins
HRH33_15250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
RsgA_GTPase
AAA_15
nSTAND3
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKJ73872
LinkDB
All DBs
Position
3380566..3384204
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADSDISIGDPRTLLRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSEQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKEARDAHKQLQDQAVGVVPLSAEDRAELDRQLA
EAQQQLKVQQAQLKQLEAQHTWLKELREWQERQLDATQQLQRAQADWDSLGAQREDLSRL
EQLAPQRHHFARQTELAAELTPLAAQIQQHIAQQAQLLTRQDQAQQQQASAHAALEAALQ
AQSDAVPLLRQAFDGQNSLAHLTKDLAKHSADQQQQAAASSEGQARLSALQAKQAEVAER
LQRLADDLERSAALAPLADAWTAYRDRLQHLMLIGNRLNKGQAELAQLEHRANTTAEAFT
GQRDALALLYQEAGAEPQAVAEQIQLLASLLQDNRKQQRAVEDLTRLWDSQQQLDQQAAT
LTQKLADAQQRRELLNQAGLQAKADLSVAEQTLTVTQQLLERQRLARSASVEELRAHLQD
GQPCPVCGSREHPYHQPEALLHSLGRHDDNEQATAQQAVDALKEKLTELRGEVGGLIAQQ
KEFLHQQEQLAAQQLALKPSLDAHPLSAALFNQDAPQRSPWLATQLAQLGQSISQDEQRQ
SALLNLQQNAGRLQQQLQAAQDASQQARQQWLDQQRELANDRERLEQELNAFASLLPADT
LDGLRNDPAATFMQLDQQVSQRLEQLGHQRDEREEQQERQQVIEKEQTHQQHRQAQLESL
SQQVAELTRQQQAAAQALAELLGPHTSAEHWQQQLEQAVAQARQSESDANQQLQDTRTTL
IQLAADLKAWQARQQALHTEQQALDARLSQWRASHPELDDAGLTRLLGMDDTQVSALRQR
LQTSEKAVEQAKVLLQEREQRLAEHQALHNGNLDAEQLDNHLAALSQQLADAEKQCAELR
ARQAEDQRRQQANNVLAEQIAKAYEEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccattcgcctgaaaaacctcgcgtccctggccgggccgttcgagatc
gacttcaccgccgagcccctggccagtgccgggttgtttgctatcaccgggccgaccggc
gccggcaagagcaccttgctcgatgcgctatgcctggcactgtttggcgcagtgccgcgc
ctgggcgacaccggccaggcgaagatgccggatgccgacagcgatatttccatcggtgac
ccgcgcaccttactccggcgcggtaccggcggcggctatgccgaagtggattttgtcggc
gtcagcggccgccgctatcgggcgcgctgggaggccaatcgcgcccgcgacaaggccagc
ggcaagttgcagaacagccggcaaagcctgatcgatctggacagcgagcaactgctggcc
agccagaaaaccgaatacaaaacccagttggaactggccctgggcttgaatttcgaacag
ttcacccgcgccgtgttgctggcgcagagcgagttcagcgcgttcctcaaggccaacgac
aacgagcgcagcgaactgctggaaaaactcactgacacggcgctatacacccagctcggc
cgccgcgccttcgacaaggccaaggaggccagggacgcgcacaaacaactgcaagaccag
gccgtgggcgtggtgccgctgagcgccgaagaccgcgccgaactggaccggcaactggcc
gaggctcagcagcagctcaaggtgcagcaagcccagctcaagcaattggaagcgcagcac
acctggctcaaggagctgcgcgaatggcaggagcgccagctagacgccacccaacagctg
caacgggcccaggccgactgggacagcctgggcgcgcagcgcgaagacctcagtcgcttg
gagcaactggcgccgcagcgtcatcacttcgcccgccagaccgagctggccgcggagctc
accccgctggccgcgcagattcagcagcacatcgcgcagcaggcccagttgctgacgcgt
caggaccaggcccaacagcagcaagccagtgcccacgccgcattggaggccgcgctgcaa
gcccagagcgacgccgtacccttgctgcgccaggccttcgacgggcaaaacagcctcgcc
catttgactaaagacctggccaagcacagcgccgaccagcagcaacaggccgccgccagc
agcgaaggccaagcgcgcctcagcgcgttgcaggctaaacaggccgaagttgccgagcgc
ctgcaacgcctggccgacgaccttgagcgcagcgccgcgctggcgcccctggccgatgcc
tggaccgcttaccgcgaccgcctgcaacacttgatgctgatcggcaatcgcctgaacaaa
ggccaggccgaactggcacaactggagcaccgcgccaacaccaccgccgaagcctttacc
ggtcagcgcgacgccttggccctgctgtaccaggaagccggcgccgagccccaggcggtg
gccgagcagatccaactgctcgccagcctgttgcaggacaatcgcaagcagcaacgcgcc
gtcgaagacctgacgcggctgtgggacagtcagcagcagctggatcagcaggccgccacc
ctcacccagaaactcgccgacgcccaacagcgacgcgaactactgaaccaggccggcctg
caagccaaggccgatctgagcgtggccgaacagacgctgacggtgacccagcagctgctg
gaacgtcagcgcctggcccgcagcgccagcgttgaagagttgcgcgcacacttgcaggac
ggccagccgtgtccggtgtgcggtagtcgcgagcacccctatcaccaacccgaagcgttg
ctgcacagccttggccggcatgacgacaacgagcaagccacggcgcaacaggcggtggat
gcgctcaaggagaaactcaccgagctgcggggcgaagtgggcggtttgatcgcccagcaa
aaggaatttctgcaccagcaggagcagttagccgcgcaacaactggcgctgaagccaagc
ctggacgcccacccgctgagcgccgcgctgttcaatcaggacgccccccaacgcagtccc
tggctggcaacccaactggctcagctcggccagagcatcagccaggacgagcagcgccag
agcgccctgctcaacctgcaacagaacgccgggcgcctgcagcagcaactgcaagcggcc
caggacgcgagccaacaagcccgtcagcaatggctcgaccagcagcgcgaattggccaat
gaccgcgagcgcctggaacaggaactcaacgcattcgccagcctgttgcccgccgacacc
ctggacggcctgcgcaacgatccggccgcgacctttatgcagctcgatcaacaggtcagc
cagcgcctggaacagttgggccatcaacgggatgaacgcgaagaacagcaggaacgtcag
caggtcatcgaaaaagaacagacccatcaacagcatcgtcaggcgcaattggagtcgctg
agccagcaagtggccgaactgacccgccagcaacaggccgccgcgcaagccctcgccgag
ctgttgggccctcataccagcgcggaacactggcagcagcagttggagcaagcggtggcg
caggcgcgtcagagcgagagcgacgccaaccagcaactccaagacacccgcaccaccttg
atccaactggccgccgaccttaaggcgtggcaggcacgccaacaggcgctgcacaccgaa
caacaggcgctcgatgcgcgcctgagccaatggcgtgcatcgcacccggaactggacgat
gccggcctcactcgcttgctgggcatggatgacacgcaggtcagcgcactgcgtcagcgc
ctgcaaaccagcgaaaaagcggtggagcaagccaaggtcttgctgcaagagcgtgaacaa
cgcttggctgaacaccaggccctgcacaatggcaacctcgacgccgaacagttggacaac
cacctcgccgcgctcagccagcaactggccgatgcggagaagcagtgcgccgaactgcgc
gcgcgccaggccgaagaccaacgtcgccagcaggccaacaacgtgctggccgagcagatc
gccaaggcctatgaagaatggcaacgctgggcccggctgaatgccctgatcggttcggcc
accggcgacaccttccgcaagatcgcccaggcctacaacctggatctgctggtgcaccac
gccaacgtgcaactgcgccagctggtgcggcgctaccgcctcaagcgcggcggcagcatg
ctcggtctgttggtgctcgacaccgaaatgggcgatgaactgcgctcggtgcattcgctg
tccggcggcgagacttttctggtatcgctggccctggccctggggctggcgtcgatggcg
tccagtaccttgaagattgagtcgttgtttatcgacgaaggcttcggcagcctcgacccc
gaatccctgcaattggccatggacgcgctggacggtttgcaggcccaggggcgcaaagtc
gccgtgatttcccacgtccaggaaatgcatgaacgcatcccggtgcagatccaggtcaag
cgtcagggcaatggcctgagcaccttggaggtcaaatga
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integrated database retrieval system
