Pseudomonas rhodesiae: HRH33_15390
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Entry
HRH33_15390 CDS
T07097
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02025
Biofilm formation - Pseudomonas aeruginosa
prx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HRH33_15390 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HRH33_15390 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prx02044
]
HRH33_15390 (tssM)
Secretion system [BR:
prx02044
]
Type VI secretion system
Imp/Vas secretion system core components
HRH33_15390 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QKJ73899
LinkDB
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Position
complement(3423919..3427299)
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AA seq
1126 aa
AA seq
DB search
MNAFFTGVGRVLRKSWVWSLLLVLCLAALVWCFGPLLAVDDYRFWQGATARLLSISVLFL
LWGLAMVVVGGRRAAWLDRPDHQARHQRQVLIDQERRQVRGRFKEALQTLKTSRCYGEHG
ERWRNDLPWYLLIGEQGSGKSQLLAAGGVRFPLDRSDPPSGTTAYFDWFLADEAVIVESA
GRYLTQPDGEVDEAGWATLLGLLKSRRRARPLNGVVVTLAVDTLLGGNEHDLDLHARHVH
ARLQDIHQTLHMDVPIYLVLTQADRLPGFAEFFDTPQGDSAQAVLGERLPASKTGTEMAQ
VRDAFEALLKRLGTELIPRLHQERSAERRGVMLDFPRQAARIAERLCLFVESGFSAHRFQ
RIFGLRGFYLTSAETADRRGHFVQGLFKQVIFAEAGLAGLQTSERRRLHLRQGLLILAAS
GVVVGSGALWTHSYSANHQRLMQLVQLIAPQPPATPGSDATLALLPLLDSRLAATQVFPA
VTDARRIERAGLYQGESSRPVLVTAYEDALRQQLLPEVAALLEAQVQATLNDREKLMDNL
RAYLMLNLPERRDATWLAERVAAQWAALYGGDSSAQNRLNAHFSYLLRLSFESPLNAERV
AAARQALRGESLAGVIYRVLRDQARNLEPYRLAEGAGVTVGEPLIPGFFTQQYVQHFEKQ
GQRLVNGIVQDNWVLGEGGDLSPMDMRQLMQELEQRYFSEYADTWSRALSRVRLEPSETL
REHVDTLAGLSSMQSPLVRLLQQVHEHTRFPTAHERLGGVQKAIERGTSTQSEAAAGLLS
GLQAQAVPDSARRALLRRFEPLHQLLDAERNPDGEWLQALRLLHEWHLQLVALNREGATE
QAAFKLVKQRMEGQQPLLGQLRDRAARLPLPLKGWLEAIADDSWRLLLDDAYVHVNQRYQ
SEVYGFYAKAIQRRYPFNAQAAGEVALGDFQEFFKPRGAMARFYESYLKPFVSTEGSRFR
LRGLDGRSLPMSRSSLEQLAKAQLIRLGFFSEEQGEWAVRFTLAPYSLDPTVSRAVLRIG
DKQLEYRHGPIVPTTFHWPEEADNGRSSLVLERGAQRPFGIEKNSGPWSFFRFLDLMQSE
PANGRNAQVLKADLAGLRANFLLSSARHPGPFQMAAWRTFRLPEQL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcttcacgggcgtgggcagagtgctgcgcaagagttgggtctggagcctg
ctgctggtgttatgcctggcggcgctggtgtggtgtttcgggccgttgttggcggtggac
gattatcgattctggcaaggggccacggcacgtctgctgagcatcagcgtgctgtttctg
ctgtggggcctggcgatggtggtagtgggagggcggcgcgcggcatggctcgacaggccg
gaccaccaggcgcgacatcaacgtcaggtgttgatcgaccaagagcggcggcaggtgcgc
gggcgtttcaaggaggcgttgcaaaccctgaaaacctcacgctgttatggggagcatggc
gaacgttggcgcaatgacttgccctggtaccttctgatcggcgaacagggcagtggcaaa
agccagttgttggccgccggcggcgtgcggtttccgctcgaccggagcgacccaccctca
ggcacgaccgcctactttgattggttcctggccgatgaggccgtgatcgtcgaaagcgcc
gggcgctatctgacgcagcccgatggtgaagtggacgaagcaggctgggcgacgttgctg
ggcttgctcaaatcgcggcgccgggcacgtccgctcaatggcgtggtggtgacgctggcg
gtggacaccttgctcggcggcaacgaacacgacttggatctgcatgcccgtcatgtgcat
gcgcgcttgcaggacatccaccagacgctgcatatggatgtgccgatttatctggtgttg
acccaggctgaccgcttgccggggtttgccgaattcttcgatacgcctcagggggacagc
gcccaagcggtattgggagagcgtttgcccgccagtaaaaccggtaccgagatggcccag
gtacgcgatgcctttgaagccttgctcaagcgtctgggcacggagctgatcccgcgattg
caccaggagcgcagtgccgagcggcgcggcgtcatgcttgattttcctcggcaggccgcg
cgaatcgccgagcggttgtgcctgttcgtggagtccgggttctcggctcatcgcttccaa
cgtatctttggactgcgcgggttctatctgacgagtgcggaaaccgctgacaggcgcggc
cattttgttcaaggcttgttcaaacaggtgatttttgccgaggccggccttgcggggttg
cagacctcggagcgacgtcgcctccatcttcgtcagggcttgctgatattggcggcatca
ggggttgtggtcggcagtggggcattgtggacgcacagttattcggccaatcatcagcgc
ctgatgcaactggtgcagctgatcgcgcctcaacccccggcgacaccaggttcggacgcc
actctggcgttgctgccactgctggacagccggctggctgccacccaggtgtttcccgcg
gtgacggatgcacgccggatcgaacgggctgggctgtatcagggcgagagcagtcgcccg
gtgttggtgacggcttatgaggacgcgctgcgccaacaattattgcccgaggtcgcggcg
ttgcttgaagcgcaggtgcaggccacgctgaacgaccgcgaaaagttgatggacaacctg
cgggcctacctgatgctcaatttgcccgagcgtcgggacgcgacctggctggccgagcgc
gtggcggctcagtgggccgcgctatatggcggggatagctcggcgcagaacaggctgaac
gcgcatttctcatatttgcttaggctatcttttgaatcgccgttgaatgccgaacgggtg
gcagcggctcgccaggccctgcgcggagagtcgctggcgggtgtgatctatcgggtattg
cgtgatcaggcccgcaatctggaaccctatcgcttggcggagggggcaggggtgacggtg
ggcgagcccctcattccggggttctttacccaacagtacgtgcagcactttgaaaagcag
ggccagcgtctggtcaatgggattgtccaggacaactgggtactcggtgaaggcggcgat
cttagtccgatggatatgcggcagttgatgcaggagctggaacaacgctatttcagcgag
tacgccgatacttggagccgtgccttgagccgcgtccgtctggaaccgagcgaaaccctc
cgagagcatgtcgatacactcgcgggcctctcctcgatgcaatcaccgctggtgcgtttg
ttgcagcaggtgcatgagcacacgcgttttccgacggctcatgagcgccttggtggcgta
cagaaggccatcgagcgcggtacctcgactcagagcgaggcggccgcagggttgcttagc
ggcctccaggcgcaggcggtgccggactccgctcgccgtgcgttgctgcgtcgcttcgag
cccttgcaccagttgctggatgccgagcgcaaccccgacggcgaatggttgcaggccttg
cggctgctccacgagtggcacttgcaattggtcgccctgaaccgcgaaggggcgacggag
caggcggcgttcaagttggtcaagcagcgcatggaggggcagcagccgctgttaggccaa
ctgcgcgacagagcggcgcgcctgccgctgcccctcaaaggctggctcgaagctatcgct
gacgacagttggcgattgctgctcgatgatgcgtatgtgcacgtcaatcagcgctatcag
agtgaggtctatggcttctacgccaaggctatccagcgtcgataccccttcaatgcgcaa
gccgcgggcgaggtcgcgctgggggattttcaggagttcttcaagccaaggggcgccatg
gcgcgtttttacgagagctacctgaagccttttgtaagcaccgaaggcagccgcttccgg
ctgcgcggcttggatggccgcagcctgccgatgtcgcgctcgtccctggagcaactggcc
aaagctcaactgattcgcctgggttttttcagtgaggagcagggcgaatgggccgttcgt
ttcacactggcaccctacagcctggacccgacggttagtcgcgcggtcctgcgtatcggc
gataagcaactggagtaccgccacggtccgatcgtgccgacgacgttccattggcctgaa
gaggcagacaacggccgcagcagtctggtgctggagcgtggcgcccagcggccattcggt
atcgagaaaaacagcgggccctggtcgttcttccgcttcttggatctgatgcaaagcgag
cccgccaatggtcgcaatgcccaggtactcaaggccgatcttgcggggctgcgcgccaac
ttcctgctcagcagcgcacgccacccgggcccgttccaaatggcggcatggcgaactttc
cgtctgccggagcagctgtga
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