Pseudomonas rhodesiae: HRH33_15420
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Entry
HRH33_15420 CDS
T07097
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02025
Biofilm formation - Pseudomonas aeruginosa
prx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HRH33_15420 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HRH33_15420 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prx02044
]
HRH33_15420 (tssH)
Secretion system [BR:
prx02044
]
Type VI secretion system
Imp/Vas secretion system core components
HRH33_15420 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
ClpB_D2-small
AAA_22
TniB
AAA_7
AAA_25
nSTAND3
Sigma54_activat
NACHT
NBD_SMAX1
Hpr_kinase_C
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QKJ73904
LinkDB
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Position
complement(3432929..3435496)
Genome browser
AA seq
855 aa
AA seq
DB search
MINVDLQQLIRTLAPQARRDLERSAERCVTRGGHEVLVEDYLLAWLEHSDCLLARALADV
GVEVGELQAILQPKAQANASRNPVFAQALVQWLQQALLVAHLQLHQTEVDHAALLLALLQ
HPQQHAGCAYQELLSRVDTQRVLEFVSSRAVETPPALADESCLARFTHDLTHQAQSGRID
PVLCRDDELRRLIDILVRRRKNNPLLVGEAGVGKTAIVEGLALRVVGGQVPELLKDVRVL
TLDMGMLQAGASIKGEFERRLKGVIEEVNASPRPIILFIDEAHTLVGAGGPAGGADAANL
LKPALARGELRTIAATTWSEYKRHFEKDPALARRFQPVHVGEPSVEQAVSILRGLVPVHE
TSHGVYVRDDAVVAAAHLSARYLAGRQLPDKAVDVLDTACARARISRVCAPEALQRLEAD
LAEGARQRLAWIRDRDAGVPVDTQALHALDLRLAAVESERHSLEQRWLEQRACAEQALTL
RRHLEDARRVGQGVDALEQALGEQRRALSALQGPQPLVHLEVCPRLVAEVISAWTGIPVE
RLAFEHSDAVTGFAQALRARILGQEPAVQALDRNLRAVAAGLNKPDAPVGVFLLVGPSGV
GKTETALALGDLLYGGERFVTTLNMSEYQEKHALSRLIGAPPGYVGYGEGGVLTEAVRQR
PYSVVLLDEVEKADPEVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGSDCITDLC
SGAQRPDAQALHAAIYPLLRDYFKPALLARMRVLPYYPIAGDVLQQLARAKLECLGRRLE
GRRLAFSYTAELVAHMADRCSHSDSGARYIDQWIETHLMPQMVDRLLEAMAVGESLSRVH
ADLDHRGQPICEFSQ
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgtagacctgcaacaacttatccgcacattggccccacaggcacggcgagat
ctggagcggtccgccgagcgatgtgtcacacggggtggccatgaggtcttggtagaggac
tacctattggcctggttggagcacagcgattgccttctggcacgggcattggccgacgtt
ggtgtcgaggtcggcgagctgcaagccatcttgcaaccaaaagcgcaggcaaacgcgtca
cgtaatccggtattcgcccaggcgctggtgcaatggttgcagcaggcattgctcgttgcc
cacttgcaattgcatcaaaccgaggtggatcacgccgcgctgctattggcgctgctgcag
catccgcagcagcatgccggctgtgcttaccaagagctgttgagccgtgtggatacgcag
cgtgtgcttgagtttgtgtcgagtcgcgccgttgaaaccccgcctgcattggctgacgag
tcctgcctggcacggtttacccacgatctgacacaccaggcgcaatccgggcgcatcgac
ccggtgctgtgtcgggatgatgagcttcgccggttgatcgacatccttgtgcgccgacgt
aagaacaatccgctattggtcggcgaagccggagtgggcaagaccgcaattgtcgaagga
ctagccctgcgcgttgtcggcggccaagtgccggaactgttgaaggatgtgcgcgtgctg
accctggacatgggcatgctgcaagccggggccagcatcaaaggtgaattcgagcggcgc
ctcaagggggtgatcgaggaggtcaatgcatccccacgcccgattattctgtttatcgat
gaagcccataccctggtgggagcgggaggcccagcaggtggggctgatgccgccaacctg
ctcaagccggcgctggcgcgcggtgagctacgcaccattgccgcgaccacctggtccgaa
tacaagcgtcacttcgagaaagacccggccctggcgcggcgcttccagcctgtccatgtc
ggtgagcccagcgtcgaacaggcggtttcgatcctgcgtgggctagtgccggtgcacgaa
accagccatggggtctacgtgcgtgacgacgccgtcgtggcggcggcacacttgagtgcc
cgttatctggcgggtcgacagctacccgataaagcggtggatgtactggataccgcttgc
gcgcgtgcgcggatcagccgggtttgcgcgcctgaggcgttgcagcgtctggaggcggat
ctggccgaaggcgcccgacaacgcctggcatggattcgcgacagggatgccggggtgccg
gtggatacgcaggctttgcacgcgctggatcttcgcttggcggcagtagagagcgagcgg
cactcattggagcagcgttggctcgaacagcgcgcgtgcgcggaacaggcactgactctg
cgccggcacctggaggacgctcgccgtgtagggcagggcgtcgacgccctggaacaggca
cttggcgaacagagacgcgcattgtctgcactgcaaggcccgcagccattggttcatctt
gaggtttgcccacgcctggtggccgaagtgatcagcgcgtggaccgggattccggtcgaa
cgcctggcgtttgagcacagtgatgcggtcactgggtttgcccaggcactgcgtgcacgc
atcctcggtcaggagcctgccgtgcaggcactggatcgtaatctaagagcggtcgccgct
ggcctcaataagcccgacgcgccggtcggtgtgtttctgctggtgggacccagcggcgta
ggcaagaccgaaacggccctggccctgggcgacttgctctacggcggtgagcgctttgtc
acgaccttgaacatgtccgagtaccaggagaaacatgcgctatctcggctgattggagcg
ccgcccggttatgtcggatacggcgagggcggcgtgttgacggaggcggtgcgtcaacga
ccgtactcggtcgtcctgctggatgaagtggaaaaggccgacccggaggtgctgaacctg
ttttatcagatcttcgacaagggcctggccaacgatggcgaaggtcgggaaatcgacttt
cgcaatacgctgatcctgatgacgtccaacctgggcagcgattgcattaccgatctgtgt
tccggcgcccagcggccggatgcgcaggcgctgcacgcggcgatctatcccctgttgcgt
gactatttcaaaccggcgctgttggcgcgcatgcgcgtattgccctattacccgatcgcg
ggcgatgtgctgcagcagttggccagggccaagctggagtgcctcgggcggcggttggaa
ggacgccggctggcgttcagctatacagcggaactggtcgcgcatatggctgaccgttgc
agccatagcgacagtggcgcgcgctatatcgaccaatggatcgagacccatctgatgcca
cagatggtcgaccgtctgttggaggcgatggccgtcggtgaatcgctgtcgcgcgtccat
gccgatcttgaccaccgtggacaaccgatctgcgagttcagccaatga
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