Pseudomonas rhodesiae: HRH33_19710
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Entry
HRH33_19710 CDS
T07097
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
prx
Pseudomonas rhodesiae
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prx03009
]
HRH33_19710
Enzymes [BR:
prx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HRH33_19710
Ribosome biogenesis [BR:
prx03009
]
Prokaryotic type
rRNA helicases
HRH33_19710
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
QKJ74705
LinkDB
All DBs
Position
complement(4369709..4371055)
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AA seq
448 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPVLN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVGECVNRQQTM
LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKAGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKTDAKGDKKKTGAKSPTKRKIANR
PKTDNLSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgcctgtgcaagccgcggccatcccgctcgcgctcgaagggcgtgacctg
cgggtgacagcgcaaaccggtagcggcaagaccgccgcgttcgtcctgccggtcctgaat
cgtttgattggcccggccaaggtccgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagctggcccagcagaccctgaaggaagtcgaacgcttctcgcagttcaccttcatc
aagtccggcatcatcaccggcggtgaagacttcaaggtgcaggccgccatgctgcgcaag
gtgccggacattctgatcggcacgccagggcgcatgatcgaacaactcaacgccggcaac
ctggacctcaaggaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggctttgccgacgacgtgcagcgcctggtgggcgagtgcgtcaaccgtcagcagaccatg
ttgttctccgctaccactggcggttcgaccctgcgcgacatggtcgccaaggtgctgaac
aacccggaacacctgcaggtcaacaacgtcagcgacctcaacgccaccacgcgtcagcag
atcgtcaccgccgaccacaatgtgcacaaagaacagatcctcaactggctgctggccaac
gagacctatcagaaagccattgtgttcaccaacacccgcgccgccgccgaccgcatctac
ggccgcctggtcgcccaggaatacaaggcgttcgtgctgcacggcgagaaagaccagaaa
gatcgcaagctcgccatcgaccgcctcaaggccggcggtgtgaagatcctggtggccacc
gacgtggccgcccgtggcctggatgtggacggcctcgacctggtgatcaacttcgacatg
ccgcgcagcggcgacgaatacgtgcaccgtatcggccgcaccgggcgggccggtaacgat
ggcctggccatctcgctgatctgccacggcgactggaacctgatgtcgagtatcgaacgc
tacctcaagcagtcgttcgagcgccgcaccatcaaggaagtcaaaggcacctacaccggg
ccgaagaaggtcaaggcgtcgggcaaggccgtcggcgtgaagaagaaaaagaccgacgcc
aagggcgacaagaagaaaaccggcgccaagtcgccgaccaaacgcaagatcgccaaccgc
ccgaagaccgacaacctgtcgttggtaagcaaggacggcatggccccgctcaagcgccgc
aaacccgaagcgccagctgctgaataa
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