Pseudomonas rhodesiae: HRH33_21090
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Entry
HRH33_21090 CDS
T07097
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx00061
Fatty acid biosynthesis
prx00071
Fatty acid degradation
prx01100
Metabolic pathways
prx01212
Fatty acid metabolism
prx02024
Quorum sensing
prx04146
Peroxisome
Module
prx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HRH33_21090
00071 Fatty acid degradation
HRH33_21090
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HRH33_21090
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRH33_21090
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
prx01004
]
HRH33_21090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prx04147
]
HRH33_21090
Enzymes [BR:
prx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HRH33_21090
Lipid biosynthesis proteins [BR:
prx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HRH33_21090
Exosome [BR:
prx04147
]
Exosomal proteins
Exosomal proteins of breast milk
HRH33_21090
Exosomal proteins of breast cancer cells
HRH33_21090
BRITE hierarchy
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF599
Motif
Other DBs
NCBI-ProteinID:
QKJ74962
LinkDB
All DBs
Position
complement(4664324..4666015)
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AA seq
563 aa
AA seq
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MNEDFWKDKYPAGIAAEINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTAVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPQAIKFNDVLAKGRGQPVSDANPVSSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCGICEGYGM
TETSPVATVNPIQHIQIGTIGIPVPSTVCKVIADDGTELPLGETGELCVKGPQVMKGYWQ
RQDATDEMLDSDGWLKTGDIAIIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKEQVMEHMRANVTGYKVPKAVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacttttggaaggataagtaccccgccgggattgctgcagaaatcaatcca
gacgagtatccaaatattcaggcggtacttaaacagtcctgccagcgcttcgctaacaaa
ccggcgttcagcaacctgggcaagacaatcacctacggtgagttgtacgaattgtccggc
gccttcgccgcctacctgcaacagcataccgacttgaagcctggcgatcgaatcgccgtg
caactacccaacgttctgcaatacccagtcgctgtgttcggtgccatccgcgccggcctg
attgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgat
tccggcgccaaggcgctggtctgcctggccaacatggcccacctggcggaaaaggtcgtg
cccaagaccgccgtcaagcatgtgatcgtcaccgaagtcgcggacctgctgccgccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaaaatggtcccggcgtatcac
ttgccccaggcgatcaaattcaacgacgtgctcgccaagggacgcggtcaaccggtcagc
gacgctaacccggtcagcagcgacgtggccgtgctgcaatacaccggtggcaccaccggc
gtcgccaagggcgcaatgctgacccaccgcaacctggtggccaacatgctgcagtgcaag
gcgctgatgggctccaacctcaatgaaggttgcgagatcctgatcacaccgctgccgctg
taccacatctatgcattcacctttcattgcatggcgatgatgctgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggagctgtcgaagtggaag
ttcagcggctttgtcggcctgaacacgctgttcgtggcgttgtgcaacaacgaagccttc
cgcaagctggacttctccgcgctgaaagtcaccctctccggcggtatggccctgcaactg
gcagcggccgagcgttggaaagccgtgaccggttgcggtatctgcgaaggttacggcatg
accgagaccagcccggtggccactgtgaacccgatccagcatatccagatcggcaccatc
ggcattccggtgccttcgacggtgtgcaaggtcatcgccgacgatggcaccgagctgccg
ttgggtgaaaccggcgagctgtgcgtcaagggcccgcaagtgatgaagggctactggcag
cgccaggatgccaccgacgagatgctcgacagcgacggttggctcaagaccggcgacatc
gcgatcatccagcccgatggctatatgcgcatcgttgatcgcaagaaagacatgatcctg
gtctccggcttcaacgtgtaccccaacgagctggaagacgtattggcgggcctgccgggc
gtgttgcagtgtgcagccatcggcgtgccggacgagaagtccggggaacacatcaagctg
tttattgtggtcaagccgggtgcgaccctgaccaaggagcaggtgatggagcacatgcgc
gccaacgtcactggctacaaggtgcccaaggcggtggaattccgcgatgccttgccgacg
accaacgtcggcaagatcctgcgtcgcgagttgcgcgatgaagagctgaagaaactcggt
cttaaaaagtaa
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