Pseudomonas rhodesiae: HRH33_21875
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Entry
HRH33_21875 CDS
T07097
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03410
Base excision repair
prx03430
Mismatch repair
prx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRH33_21875 (recJ)
03430 Mismatch repair
HRH33_21875 (recJ)
03440 Homologous recombination
HRH33_21875 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_21875 (recJ)
DNA repair and recombination proteins [BR:
prx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HRH33_21875 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HRH33_21875 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HRH33_21875 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QKJ75112
LinkDB
All DBs
Position
complement(4831330..4833039)
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AA seq
569 aa
AA seq
DB search
MRIDPRPLPAVLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDTAVDLL
VTALEQRQRILIVGDFDADGATASAVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQREPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGEELPAADAIVNPNQPGCTF
PSKALAGVGVIFYVLMALRARLRELGWYANTPQPNIGDLLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTRDFAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVDSMPYGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVPGFHIRDALAVVASQHPTLISKYGG
HAMAAGLTLPEENFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgatcctcgtccgttgcccgccgtcctgccgtttctcggtgacttgccgccc
ctgttgacccgcctttacgccgcgcgcggggtgcagtccgaggccgagctggacaagagc
ctggcgcggttgattccctaccagcagctcaaggggatcgataccgcggtggacttgctg
gtgaccgcgctggagcaacgccagcgcatcctgatcgtgggcgacttcgatgccgatggc
gccacggccagcgccgtcggcaccctgggcctgcggttgctgggtgcggcccatgtcgat
tatctggtgcccaaccgcttcgaatacggttatggcctcacgccggaaatcgtcgccgtg
gcgctgcagcgcgagccgcaactgctgatcaccgtggacaacggcatttccagcgttgaa
ggcgtagcagcggccaaggcggcggggctgaaggtgctggtcaccgaccaccacttgccg
ggggaagagttgccggcggcggacgccatcgttaatccgaaccagcctggctgcacgttc
cccagcaaagccctggccggtgtcggcgtgattttctacgtattgatggccctgcgcgca
cgcctgcgcgagttggggtggtatgcgaacacaccacagcccaatatcggggacctgctc
gatctggtagccctgggcagcgtcgccgacgtggtgcccctggacgccaacaatcgcatt
ctcgtccatcaggggctggagcgtattcgcgccgggcgcgcgcgaccagggatcaaggca
atccttgaagtggccaagcgcgatgcggcgcgaatcacctccaccgatctgggttttatc
ctcgggccacggctcaacgccgccgggcgcctggacgatatgagcctgggtatcgaatgc
ctgctgactcgcgatttcgctgcggcgcgtgagatggccgcgcaactggacggcatgaac
caagaccgtaaatccatcgagcagggcatgcagcgcgaggccctggcccagctcaaggac
ttgccggttgactccatgccctatggcctgtgcctgttcgatccggagtggcatcagggg
gtgatcggcatcctggcgtcgcgcatgaaagaacgctatttccgcccgaccatcgccttt
gccgacgccggtgacggcctgcttaaaggctcagggcgatctgtgccgggtttccatatc
cgtgacgcgctggccgtagtcgctagccagcatcccacgctgatctcaaaatacggcgga
cacgccatggcggcggggctgacgttgcctgaggaaaatttcccgctgttcgctgaagct
ttcgatgccgaagtgcgtcggcaattgcgtgaagaagacctcaccgggcgcctgctgtcc
gatggcaccttggcggtggaggaattccacctggaactggcccgcgctctgcggcatgcc
ggcccttggggccagcactttcccgagccgttgtttcacggggtgttccagttggtagag
cagcgggtggtgggggagcggcacctgaaggtggtgctcaagagtgagtgcggttcggtg
aagctcgacggcatcgcgttcggggtggatcgggaagtctggccgaacccgacggtgcgt
tgggtggaattggcctacaagctggatgtgaacgagtttcgtggcaatgaaaccgtgcaa
ctgatgattgcccacatcgaaccgcgctag
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