Pseudomonas rhodesiae: HRH33_22705
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Entry
HRH33_22705 CDS
T07097
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HRH33_22705 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_22705 (recC)
Enzymes [BR:
prx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HRH33_22705 (recC)
DNA repair and recombination proteins [BR:
prx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HRH33_22705 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QKJ75271
LinkDB
All DBs
Position
complement(5011123..5014575)
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AA seq
1150 aa
AA seq
DB search
MPDAMSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
AKPLSPANCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINTLEEAPPDLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNKYKRQARKAGMPISI
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSESTPTTLLNQL
QDDILELRPLNETRDLWPAVDLEHDSSIRFHIAHSAQREVEVLHDQLLQRFSADPTLRPR
DIIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEVLDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLDAQQRAGLGLPAELEQNS
WRFGLRRMLLGYAVGSGAACEGIEPYDEIGGLDAALIGPLVALLDALSDAHQALSEPAAP
QQWGERLQDLMQRFFLASSEHDDYLLSQLEQLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWKHAA
NDAPLIDALTQEHPLQPFSARYFHAGDPLFSYAREWQVLHEDVPVTGTEPELAQHQQEEP
LSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLNAALSQ
PEHLDQALKAQAQRLQGSGLLPMVGFGECLRNELIEPLPGLLQRYQQLLALWPIPHTATE
PVSFEHQGIRLEGWISGLHRRSDGGLLSVSTIPNSIGSIKTRKWHRLIRPWVNHLVACAC
GLPLSTGLVASDDTLLLAPLDPALAQDILGHLLLAWHSGMRKPLPVAVKTAFAWLGQTDP
AKAHAAASKAYEGDGLTTDGERRETPALTRQFPDYAALVASEEFEGWCETLYRPMLDAPW
RSLTGEEAGA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcgatgtccctcagcgctggattcatggtggttcacggtaaccgcttggat
gagttgcgcagcctggtggttagctggatgcgccggtatcccctcgcgcccctggaaaat
gaaattgcattggtacaaagcaacggtatcgcccagtggctcaagctggcattggctgaa
gatccggaagacgatgacatgggcggctgcggcatcgctgctgccatcgacgtacaactt
cccggcagttttatgtggcagctctatcgcatggtcctggggcgtgacgaaatccctccc
aaatccttgctcgataaagccccactcacttggcggttgatgcgcctactgcccgagctc
attgaccaaccgcacttcgagccgttgcagcgcttcctgacccacgacaccgacctgcgc
aaacgctatcaattggccgaacgcctggccgacctgttcgaccaatatcaggtctaccgc
gccgactggctggaagattgggctgccggtcgccatcaactgcgcaatggacgaggtgag
gccaagcccctcagtccggcgaactgctggcaggccgagttatggcgtgcgttgctgctg
gatgtcggtgaggagggcatggccgaaagccgtgccggcgtgcatcagcgttttatcgaa
cgcatcaataccctggaggaagctccacccgacctaccttcacgggtcatcgtgttcggt
atttcgtcgttacccgcccaggctctcgaagcactcgccggtctggctcgtttcagtcaa
gttctgttatgcgtacacaacccctgtcgccaccattggtccgacatcgtggccgacaaa
gacctgcttcgaaacaaatacaaacgccaggcgcgtaaagccggcatgccgatcagtatc
gacccgcaaaccctgcaccagcatgcccatccgctgttggctgcttggggcaaacagggg
cgcgactacatcagcctgctggacagttacgatgatcccaatagctaccgcgccgcattc
cgcgatggacgcatcgatctgttcagcgagagcaccccgaccacactgctcaatcagttg
caggacgatatcctcgaactgcgcccactcaatgaaacccgcgatctatggcccgctgtc
gacttggagcatgattcgtctatccgtttccacatcgcccacagcgcgcaacgtgaagtc
gaagtgctgcacgaccaactgctgcagcgcttcagtgccgatcccacgctgcgtcctcgt
gacatcatcgttatggtcccggatgtcgacagctacgcgccgcacatacgcgctgtgttc
ggtcagcttgagcgcaacgatccgcgctttatcccgttcaccctgacggaccagggccaa
cgcggccgcgatccgttgctgatcgcagtcgagcatctacttaaactccccgacagccgc
ttccccgtcagcgaagtcctcgatctgctcgacgtccccgccctgcgcgaacgctttgca
atcaaggaacgcgacctgccgacgctgcatcgctggatcgaaggcgctggtatccgctgg
gggctcgacgcgcaacagcgtgccggcctgggcctgcctgctgagcttgaacagaacagc
tggcgcttcggcctgcgccgcatgttgctggggtacgcggtgggcagcggcgcggcctgc
gaaggtatcgaaccttacgacgaaattggcggcctcgacgcggcgctgattggcccgttg
gttgccttgctcgatgcgctgagtgacgctcatcaggccttgtccgagccagcagcgccg
cagcaatggggcgagcgcttgcaagacttgatgcagcggttcttcctggccagtagtgaa
cacgatgactatctgctgagccaactggaacagctgcgagaaacctggttggaaacctgt
gagtccgtcggcctgcaggacgagttaccgctcaccgtggtccgcgaagcctggctcgcc
ggtctggatcaaggccgactgtcccaacgtttcctcgccggagctgtcaatttctgcacc
ctgatgcccatgcgtgccattcccttcaagctggtctgcctgctgggtatgaacgacggc
gattaccctcgcgcccaaccaccgctggacttcgacctgatgggcagcgactaccgccca
ggcgaccggtcccgtcgcgaagacgaccgttacttgctgctcgaagccctgctctctgcc
cgagaccagctctatatcagttgggtcggccgcagcatccgcgacaacagcgagcgtccg
gcttcggtgctgatcggccagttgcgcgatcatctcgccagcggctggaagcacgcggcg
aacgacgcccccctcattgacgcgctgacccaggaacacccattgcagccgttcagcgcc
cgctatttccacgcaggcgatccgctgttcagctacgcccgcgaatggcaggtattgcac
gaggacgtgcccgtcaccggcacggagccggaattggcgcagcatcagcaagaagaacct
ctaagtctcggtcagttacaggatttcctacgcaacccggttaagcatttcttcagccag
cgtctgaaagtgttctttgaggccgccgaagtacctctggccgatgaggaacccttcgtc
cttgatgctctgcaacgctacagcctgagcgacagcctgctcaatgccgcgctgagccaa
ccggagcacctcgaccaggcgctcaaggcgcaggcccagcgcctacaaggcagtggcctg
ctgcccatggttggtttcggcgaatgcctgcgcaacgaactgatcgagcctttgcccggc
ctgctgcaacgctaccagcaactactggccctatggccaatcccgcataccgcgacggaa
ccggtcagttttgagcatcaggggatcaggttggaaggctggatcagtgggctgcatcgg
cgcagtgatggcgggttgcttagcgtcagcaccatccctaatagcatcggctcgatcaag
acacgcaagtggcatcgtctgatccgcccatgggtcaatcatctggtggcctgcgcttgc
gggctgccgttgagtaccggcctggtggccagtgatgacaccttgctgttggcccccctg
gacccagcgctcgcccaggatatcctcggccacctgctcctggcctggcacagcggcatg
cgcaagccgctgccggtggcggtcaagaccgcattcgcctggttgggccagaccgatccg
gccaaagcccatgccgcggcgagcaaagcctacgaaggcgacgggctgaccaccgacggc
gaacgccgggaaacccccgcactcacgcgccaatttccggattacgcagccttggtggcc
agcgaagaattcgaaggttggtgcgaaacactgtaccgacccatgcttgatgcgccgtgg
cgatcacttactggcgaggaggccggcgcatga
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