Pseudomonas rhodesiae: HRH33_22910
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Entry
HRH33_22910 CDS
T07097
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRH33_22910 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prx03019
]
HRH33_22910 (pnp)
03016 Transfer RNA biogenesis [BR:
prx03016
]
HRH33_22910 (pnp)
Enzymes [BR:
prx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HRH33_22910 (pnp)
Messenger RNA biogenesis [BR:
prx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HRH33_22910 (pnp)
Transfer RNA biogenesis [BR:
prx03016
]
Prokaryotic type
tRNA degradation factors
HRH33_22910 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
KH_N4BP1_2nd
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
QKJ75306
LinkDB
All DBs
Position
complement(5060378..5062483)
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVTELAAEAAKPTWTWAPQAEA
TELLGTIRSEFGAAISDAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaatttcagttcggtcagtcgaccgttaccctcgagacaggc
cgtatcgcccgtcaagcctccggcgcagtgctggttaccgttgatgacgacgttactgta
ttggtgaccgttgttggcgccaagaccgctgaccctagcaaaggcttcttccctctttcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaagggcgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtgtccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacttcggctgccctggccatc
tccggcattcctttcgatggcccgatcggcgctgcccgcgttgcgttccacgaaagcacc
ggttacctgctgaacccgacttacgagcaactgaaagcgtcgagcctggacatggtcgtt
gccggtacctcggaagccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgctgtgctgttcgcccacgacgaattccaggccgttatcaaagcggtc
accgagctggctgccgaagccgccaagccaacctggacctgggctccgcaagctgaagcc
accgaactgctgggcaccatccgctctgagttcggcgctgccatctccgacgcctacacc
atcaccgtcaaggccgaccgttatgctcgcctgggcgagttgaaggatcaggtcgtggcc
aagctgtccggtgaagaaggccagccttccgccagcgacgtcaaagctgcatttggtgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggccgc
gatacccgtaccgtgcgcccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggccctgttcacccgtggtgaaactcaggcactggtagttgcgaccctgggcactgcc
cgtgacgcacaactgctggacaccctggaaggcgagaaaaaagaccccttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgtatgggcggtgcaggtcgtcgc
gaaatcggtcacggccgtctggcccgtcgttcggttcaggccatgctgccggctgctgac
gtgttcccgtacaccatccgtgtcgtatcggaaatcactgagtccaacggttccagctcc
atggcttccgtgtgcggtgcttccctggcactgatggacgccggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggtgaaggaaggcgagaagtttgccgtcctgacc
gacatcctgggtgacgaagaccacttgggcgacatggacttcaaagtagccggtaccgct
aaaggtgttactgcgctgcagatggacatcaagatcaaaggcatcaccgaagaaatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcattggtcagtcgcgtaccgaactgtcggaaaacgctccgaccatgatcgcgatgaag
atcgacaccgacaaaatccgtgatgttatcggtaaaggcggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcctcgatcgatatcgaagacgatggttcgatcaagatcttcggc
gaaaccaaggaagctgcggaagctgcgcgtcagcgcgtgctgggcatcactgcagaagct
gagatcggcaaaatctacgtaggtaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccaggcaaggacggtctggttcacatctccatgttgagcgacgctcgcgtg
gagaaggtgaccgatatcctcaaagaaggccaggaagtggaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaggacgtagcagcggccaaagcctcgggc
gtttaa
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