Pseudomonas rhodesiae: HRH33_23340
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Entry
HRH33_23340 CDS
T07097
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
prx
Pseudomonas rhodesiae
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prx03016
]
HRH33_23340 (trmA)
Enzymes [BR:
prx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
HRH33_23340 (trmA)
Transfer RNA biogenesis [BR:
prx03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HRH33_23340 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Cons_hypoth95
Methyltransf_11
Methyltransf_12
MTS
DREV
TRM5-TYW2_MTfase
RrnaAD
Ubie_methyltran
Methyltransf_15
PrmA
Motif
Other DBs
NCBI-ProteinID:
QKJ75381
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All DBs
Position
5165087..5166166
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AA seq
359 aa
AA seq
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MTFDAARYTAQLQDKVTRLRDLLAPFDAPEPQVFDSPLQHFRLRAEFRLWREGGERHYAM
FSQDDKRTPILIEDFPIASARINQLMPQLKAAWQASAALSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHAAANQLAADLNVSIIGRSKGKRDVIGHDYVVEKLEVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEALGDRPDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLDENAVENVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPETLAANIAQLHDTHRITRCAMFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgacgccgcacgctacaccgctcaactgcaagacaaggtcacgcgcctgcgt
gacctgctcgccccgttcgatgcacccgagccgcaggtgttcgactcgccgctgcagcac
ttccgcctgcgcgcggaattccgcctgtggcgcgagggcggtgagcgccactacgcgatg
ttttcccaggacgacaagcgcacgccgatcctgatcgaagacttccctatcgccagcgct
cgcatcaaccagctgatgccccaactcaaggccgcctggcaagccagcgccgccctgagc
cacaagctgttccaagtggagttcctcaccaccctggccggcgatgcaatgatcaccctg
tgctatcaccgcccgctggacgagcactggcacgcggcggccaaccagctcgccgctgac
ctgaacgtgagcatcatcggccgctccaagggcaaacgcgatgtgatcggccacgattac
gtggtagagaaactcgaagtcggcggtcgcaccttcagctatcgccaacccgaaggcgcg
ttcacccagcccaacggcacggtgaaccagaagatgctcaactgggcctacgaggctttg
ggcgatcgcccggacgatctgctggagctgtattgcggcaacggtaatttcaccctgccc
ctggcgacccgcgtgcgcaaagtgctggccaccgagatcagcaagacctcggtaaacgcg
gcactgagcaatctcgatgaaaacgcggtggagaacgtcaccctggtgcgcctgtccgcc
gaagaactcaccgaagccctcaacgaagtgcgcccgttccgccgcctgcacggtatcgat
ctgaaaagctacgagttcggcagcgtgtttgtggacccaccgcgtgccggcatggacccg
gacacctgcgagctcacccggcgtttcgacaacatcctgtacatctcctgcaacccggag
accctggcggccaacatcgcccaactgcatgacacccaccgcattacccggtgcgcgatg
tttgatcagtttccgtggacgcaccatatggaatcgggtgtgttgctgacccgacgctaa
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