Pseudomonas rhodesiae: HRH33_23800
Help
Entry
HRH33_23800 CDS
T07097
Name
(GenBank) RHS repeat protein
Organism
prx
Pseudomonas rhodesiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
DUF7586
OCRE
TcdB_toxin_midN
Motif
Other DBs
NCBI-ProteinID:
QKJ75466
LinkDB
All DBs
Position
5259403..5264019
Genome browser
AA seq
1538 aa
AA seq
DB search
MTHASHIASIEHELDGFHQSLVTYRQQMGAWYSRTVDSVSHAADMPSLLGMDRVLRVGDS
QTTVSMSDANFIGSVAVCQLGGELKIESKFDSVYDVPIGDIPVEVIRLDDGSSTRVMLDE
HGKGSHHCAAGGRYQVRVQGGVSQEQVDALFASYAGLMADLERWLREQWQGFKPHWQQST
ASAIGSGVLAGSWAAIRDVWDSIKLVQAILENPLKYVEQLGAEAAKLAQIATDAPKVMEQ
AMLLASDEAALFLLVRTAMIWLGALPPSEIAQVAAGFVVSLLIDLVIGAVLTIALPAAAV
AYLSLRLARYGAQIVKAAVGFVQSVLAILTRFMQAVDRYKAVAVRGVVGGVKQGTLQMRW
RARQNAVLKQKEPVDDAPLVATNPKGDAAASADKTVTNGCPVSMVTGEELLTLTDGTLDG
ILPFEWTRLYRTSAVEVDLGLGFGWSHGLAQRLLVSGDSVVWTDHENRSISFPIPTVARP
AITNSLAEAAIYLGASPDELVLAQASRFYHFRDGVLTAISDAYDNRLRIFRDVLGRIERV
DNGVGRSLFLRYGSGRIVAVDYQIQRAEGRGPYAWTTEQNVVSYAYDDLGRLVSATNAVG
ESEVYRYDDQHVIVERGLAGGASFFWAWERSGKAARCVRHWASFSQMDTRYVWGDDGQVT
VHNADGSQEIYVHDDRARLVQRIDPDGAQHFKSYDAKGRLTVEQDPLGAVTAYQYDEAGR
LVALFPGEDEPTTYEHDHGFVRVVRRGEAVWKYERNDQGDVIRKIDPDGHVTDYSYNKHG
QLTGVWYPDHSCHRLVWNERGQLVEEQLPNGGIRRYRYDDLGREVAREDEHGALTQYQWD
AVGRLTRLTLPGGATREYSYNPYGKITAERDELGHVIRYDYADGLHLISRRLNADGTQVQ
YRYDNARLLLTEIENEVGETYRLNYHPNGLIQQEVGFDGQRTAYVYDLNGNLQEKTEYGD
DGSQLVTRYERDHAGRLVRKILPDGQTVDYTYDRQGNLLSVDDGHWALAYEYDRQNRLTA
EHQGWGTLRYGYDACGQLKHLRLPDNNRVAFNRDKGGHLATVELNGKTLTSHLFNAGLEH
QRQQGQLLSHYHYDDQQRLHAHAVTHQSHPLLQRQYDYDRAGNLTRLLDTRKGEHHYRYD
PLQRLTRANHSHDVQERFAHNPAGNLLMQNRPGPDIVAGNRLLIQGDRHYTYDAFGNLTQ
ERRGKGQQLVTEYRYDSQHRLIEITRPNGQTARYRYDPFGRRISKTVDGLTTEFFWQGDT
LIAEHQAGRHRSYLYEPDSFRPLVLLEGFGPKETQPYHYQLDHLGTPQELTTPEGDIAWS
AHYRAYGEIARLDVGKLDNPLRFQGQYFDEESGLHYNRHRYYNPDIGRYLTPDPVKLAGG
INGYRYVPNPTGWVDPLGLSTCPGNKECKPSLSVDEPVPRHNDGQPSLPTAHSHFPSDPN
DLTDVLGVAPKVSTTKHGTQRMEWKPNSNTRIRFESHPGDEGVFVQRHHGEHYHIELKPN
DFSWKQAEKNSLVMKVLPHNYEEGHGTGFLPGEKHPGS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgcttcccacattgcctctatcgaacatgagctggatggctttcatcagagc
ctggtgacttatcgccagcagatgggcgcctggtattcgcggacggtggattcggtgagc
catgcggcagatatgccgtcgttgctggggatggatcgggtgttgcgcgtcggtgactcg
cagacaaccgtaagcatgagcgacgctaactttatcggcagtgttgccgtgtgccagttg
ggcggcgagctgaagatagagagcaaattcgactcagtgtatgacgtgccgattggcgac
attccggtcgaggtgatcaggctggatgacggcagttccacgcgggtcatgttggatgag
cacggcaagggctcacaccactgcgccgctggcgggcgctatcaggttcgggtacagggc
ggtgtttcccaggagcaggttgacgcgttgttcgcctcctacgccgggctgatggcggac
ctggagcggtggcttcgcgaacagtggcaaggcttcaagccgcattggcagcagtccacg
gccagtgcgattggcagcggcgtgctggcgggcagttgggccgcgatccgggacgtgtgg
gacagcatcaagctggtgcaggcgattcttgaaaacccgttgaagtacgtcgaacagctg
ggagccgaagcggccaagctggcacaaatcgccaccgatgcgcccaaggtcatggaacag
gcgatgttgctcgccagtgatgaggcggcgctgttcctgctggtgcgcacggcgatgatc
tggttgggcgcattgccgcccagtgagattgcgcaagtggccgctgggtttgtggtgtcg
ctgctgattgacctggtgattggcgcggtgctgaccatcgcattgccggcggcggctgtg
gcgtatttgagcctgcggttggccaggtatggcgcacagattgttaaagcggctgttggt
tttgttcagagcgtgctggcgattctgacgaggttcatgcaggcggtggatcgctacaaa
gcggtagcggttcgcggcgtggtcggcggagtgaagcaaggcacgctgcagatgcgctgg
cgggcgcggcagaacgcggtgctgaagcaaaaagagcctgtggatgatgcaccgctcgtg
gcgacaaatcctaagggcgatgcggcggcttctgcggataaaaccgtcactaacggctgc
cccgtatcgatggtcaccggcgaggaattgctgaccctgactgatggcacgttggatggg
attttgccgtttgaatggacacgcctgtatcgcaccagtgcggtggaagtcgatttagga
ctggggtttggctggagccacggcctggcacagcggctgctggtttcaggcgattcggtg
gtgtggaccgaccatgaaaatcgctctatctcgtttccaatccccaccgttgcgaggccg
gcaatcaccaatagcctggccgaagcagcgatctatctgggggcttcgccggatgagctg
gtgctggcccaggcatcgcggttctaccactttcgcgacggtgtgctgacagcgatcagc
gatgcgtatgacaaccgcctgcgaattttccgcgacgtgctcggacgtatcgagcgggtg
gataacggggtgggtcgctcgttgtttctgcgctatgggagcgggcgcattgttgcggtg
gattatcagattcagcgcgccgaaggccgtggtccgtatgcctggacgactgagcaaaac
gtcgtttcctacgcctatgacgacctgggccgactggtctcggcgaccaatgccgtcggc
gaaagcgaggtgtatcgctacgacgatcagcacgtcattgtggaacgcggcctggccggt
ggggcgagtttcttctgggcgtgggaacgctccggcaaagcggcgcgctgtgtgcggcac
tgggccagcttctcgcagatggacacgcgctatgtgtggggcgatgacggccaagtcacg
gtgcacaacgccgatggcagccaggaaatctatgtccacgacgaccgtgcgcgattggtg
caacgcatcgatcccgatggcgcgcagcacttcaaatcctacgacgctaaaggccggctg
acggtcgagcaggatccgctgggcgcggtgacggcctaccagtacgacgaggccggacgg
ctggtggcgctgtttcccggcgaagatgagcccactacctacgagcatgaccacggtttc
gtacgcgtggtgcgccggggtgaagcggtctggaaatacgagcgtaacgatcagggcgat
gtcattcgtaagatcgatcctgacggtcacgttaccgactacagctacaacaaacatggg
caactgaccggcgtctggtacccggaccacagctgccatcgcttggtgtggaatgagcgc
gggcaactggttgaggagcagttgcccaatggtggcatcaggcgctatcgctacgacgac
ctgggccgcgaggtggcgcgcgaggatgaacatggcgcgctgacccagtaccagtgggac
gctgtgggtcggctgactcgtctgaccctgccaggcggtgccacccgcgaatacagctac
aacccctacggaaaaatcaccgccgaacgcgacgaactcggccacgtcatccgctacgac
tacgctgacggcctgcacctgatcagccgtcgcctgaatgccgatggcactcaggtccag
taccgctatgacaacgcccgattactgctcaccgaaatcgaaaacgaggtcggcgagacc
taccgactcaactatcaccccaacgggctgatccaacaggaagtcgggtttgatgggcag
cgcaccgcttacgtttacgacctcaacggcaacctgcaggaaaagaccgaatacggcgac
gacggcagtcagctcgtcactcgttacgaacgcgaccacgccggacgcctggtacgaaaa
atcctgcccgatggccaaaccgtcgattacacctacgaccgccagggcaatctcctcagc
gtcgacgacggccactgggcgctggcctacgagtatgaccgccaaaaccgcctcaccgcc
gaacaccagggctggggcaccctgcgctatggctacgacgcctgcggccagctcaagcac
ctgcgcctgccggataacaaccgcgtggccttcaaccgcgacaagggcgggcaccttgcg
actgttgaattgaatggcaaaaccctgacctcgcacctattcaacgccggtctggagcac
cagcgtcaacaaggccaactgctcagccactatcactacgacgaccaacagcgcctgcac
gcccacgccgtcacccaccagagccacccgctgctgcagcgccaatacgactacgaccga
gccggcaacctcacccgcctgctcgacacccgcaaaggcgaacaccactaccgctacgac
ccgctgcaacgcctgacccgcgccaatcattcccacgacgtgcaggaacgtttcgcccac
aacccggccggcaacctgctgatgcaaaaccgccccggccccgacatcgtcgccggcaac
cgcctgctgatccagggcgaccgccactacacctacgacgccttcggcaacctgacccag
gaacgccgtggcaaaggccagcaactcgtcaccgaataccgttatgacagccagcaccgg
ctgatcgaaatcacccggcccaacggccaaaccgcccgttaccgctatgacccgtttggc
cggcgtatcagcaaaaccgtcgacggcctcaccaccgaatttttctggcaaggcgacaca
cttatcgccgaacaccaagcgggccgccaccgcagctacctctacgaacccgacagcttc
cggccgctagtcctactggaaggcttcggtccaaaagaaacacagccctaccactaccaa
ctcgaccacctcggcacaccccaggaactcaccacccccgagggcgatatcgcctggtcc
gcccactaccgcgcctacggtgaaatcgcccgcctcgacgtaggcaaactcgacaaccca
ctgcgcttccagggccagtacttcgacgaagaaagcggcctgcactacaaccgccatcgc
tactacaatccggatattggtcgctacctgacgccagacccggtgaagttggcgggtggg
atcaatgggtatcggtatgtgcctaaccctacggggtgggtggatccgctgggactgagt
acatgcccagggaataaagaatgtaaaccatcgttgagtgttgacgagcctgtaccgcga
cacaatgatggacagccaagcctacccactgcccactctcattttccaagcgatcctaat
gatttaacagacgtgctaggagtagcgccaaaagtctccacgacaaagcatggcactcag
cgaatggagtggaaacctaacagtaatacccggattagatttgagagccatccgggagat
gagggtgtattcgtacagagacatcacggcgagcactatcacatagagctaaagcccaac
gacttcagttggaaacaggctgaaaaaaacagtctagtaatgaaagtactaccacataat
tacgaagaagggcacggaaccggatttttgccgggtgaaaaacatccaggaagctga
DBGET
integrated database retrieval system
