KEGG   Pseudomonas rhodesiae: HRH33_24705
Entry
HRH33_24705       CDS       T07097                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
prx  Pseudomonas rhodesiae
Pathway
prx02020  Two-component system
Brite
KEGG Orthology (KO) [BR:prx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HRH33_24705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prx03021]
    HRH33_24705
Transcription machinery [BR:prx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HRH33_24705
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH HTH_31 BrxR_CTD HTH_24 HTH_29
Other DBs
NCBI-ProteinID: QKJ75632
LinkDB
Position
5442605..5443123
AA seq 172 aa
MSSVQNPHSERVGALYRDHRGWLLAWLRRNVACPSRAEDLSQDTFMRLLGRDTLPEPREP
RAFLVAIAKGLLFDYFRRAALEQAYLAELMLIPESEHPSPEAQQLILEDLKAIDRLLGTL
SSKARAAFLYSRLDGLGHAQIAQRLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq 519 nt   +upstreamnt  +downstreamnt
ttgtcgtcggtccagaaccctcacagtgagcgggttggtgcgttgtatcgcgaccatcgc
ggctggctgctggcctggctgcggcgcaacgtggcgtgcccgagccgggccgaagacctg
agccaggacacgttcatgcgcctgttggggcgcgacacgttgccggaaccgcgcgagcca
agggcatttctggtggccatcgccaagggcctgttgttcgactatttccggcgcgcggca
ttggagcaggcttacctggccgaattgatgctgatcccggaaagcgaacacccctccccc
gaagcccagcaactgatcctcgaagacctcaaagccatcgaccgattgctcggcacgttg
tcgagcaaggcccgcgcggcgtttctctacagtcgtctcgacggcctgggccacgcgcag
atcgcccaacgcctcggcgtatcggtgccccgcgtgcgccagtacctggcccagggcatt
cgccagtgctatatcgcactgtatggcgagccgacatga

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