KEGG   Pseudomonas rhodesiae: HRH33_26240
Entry
HRH33_26240       CDS       T07097                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
prx  Pseudomonas rhodesiae
Pathway
prx00300  Lysine biosynthesis
prx00470  D-Amino acid metabolism
prx01100  Metabolic pathways
prx01110  Biosynthesis of secondary metabolites
prx01120  Microbial metabolism in diverse environments
prx01230  Biosynthesis of amino acids
Module
prx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:prx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HRH33_26240 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HRH33_26240 (dapF)
Enzymes [BR:prx01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HRH33_26240 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like
Other DBs
NCBI-ProteinID: QKJ75926
LinkDB
Position
5764056..5764886
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLIVEAPTNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGVIELDIRNDGQISVNM
GAPRLVPADIPFQASEQATSYAVEVDGKVVDLAAVSMGNPHAVLRVTDINNAPVHELGPK
IENHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAITQGWMDSPL
LIDLPGGRLSIEWAGPGHPVMMTGPATRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacgggctgggcaatgatttcatggttctcgacctg
gtcagccagcacgcgcatatcctgcccaagcacgccaaacagtggggcgaccggcatacc
ggcgtcggcttcgaccaattactgatcgttgaagcgcccactaacccggaggtggatttc
cgttaccggatcttcaactccgacggttccgaagtggaacagtgcggcaatggtgcgcgc
tgctttgcgcgcttcgtgctggacaaacgcctgaccgccaaacgccagattcgcgtcgag
accaagagcggcgtgatcgagctggatatccgcaacgacggccagatcagcgtcaacatg
ggcgcgccacgtctggtgccggcggatattccgttccaggccagcgagcaggcgaccagt
tatgccgtagaggtcgacggcaaagtggtcgacctggcggccgtgtccatgggcaacccc
cacgccgtgctgcgcgtcaccgatatcaataacgccccggtgcatgaactggggccgaaa
atcgaaaaccacccgcgctttccggcgcgggtcaatgtgggctttttgcaggtgatcgac
cgtcaccgcgcgcaattgcgcgtgtgggaacggggcgccggcgaaacccaggcctgcggt
accggcgcctgcgccgctgccgtcgccgcgatcacccaggggtggatggattcgccgctg
ctgatcgacctgcccggtgggcgcttgtccatcgaatgggcgggcccgggccacccggtg
atgatgaccgggccggccacgcgcgtatacgaaggacaggtccgtctatga

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