Pseudomonas rhodesiae: HRH33_26240
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Entry
HRH33_26240 CDS
T07097
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx00300
Lysine biosynthesis
prx00470
D-Amino acid metabolism
prx01100
Metabolic pathways
prx01110
Biosynthesis of secondary metabolites
prx01120
Microbial metabolism in diverse environments
prx01230
Biosynthesis of amino acids
Module
prx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HRH33_26240 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HRH33_26240 (dapF)
Enzymes [BR:
prx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HRH33_26240 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
QKJ75926
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Position
5764056..5764886
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLIVEAPTNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGVIELDIRNDGQISVNM
GAPRLVPADIPFQASEQATSYAVEVDGKVVDLAAVSMGNPHAVLRVTDINNAPVHELGPK
IENHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAITQGWMDSPL
LIDLPGGRLSIEWAGPGHPVMMTGPATRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacgggctgggcaatgatttcatggttctcgacctg
gtcagccagcacgcgcatatcctgcccaagcacgccaaacagtggggcgaccggcatacc
ggcgtcggcttcgaccaattactgatcgttgaagcgcccactaacccggaggtggatttc
cgttaccggatcttcaactccgacggttccgaagtggaacagtgcggcaatggtgcgcgc
tgctttgcgcgcttcgtgctggacaaacgcctgaccgccaaacgccagattcgcgtcgag
accaagagcggcgtgatcgagctggatatccgcaacgacggccagatcagcgtcaacatg
ggcgcgccacgtctggtgccggcggatattccgttccaggccagcgagcaggcgaccagt
tatgccgtagaggtcgacggcaaagtggtcgacctggcggccgtgtccatgggcaacccc
cacgccgtgctgcgcgtcaccgatatcaataacgccccggtgcatgaactggggccgaaa
atcgaaaaccacccgcgctttccggcgcgggtcaatgtgggctttttgcaggtgatcgac
cgtcaccgcgcgcaattgcgcgtgtgggaacggggcgccggcgaaacccaggcctgcggt
accggcgcctgcgccgctgccgtcgccgcgatcacccaggggtggatggattcgccgctg
ctgatcgacctgcccggtgggcgcttgtccatcgaatgggcgggcccgggccacccggtg
atgatgaccgggccggccacgcgcgtatacgaaggacaggtccgtctatga
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