Polymorphospora rubra: Prubr_08330
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Entry
Prubr_08330 CDS
T07190
Symbol
holA
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pry
Polymorphospora rubra
Pathway
pry03030
DNA replication
pry03430
Mismatch repair
pry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Prubr_08330 (holA)
03430 Mismatch repair
Prubr_08330 (holA)
03440 Homologous recombination
Prubr_08330 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pry03032
]
Prubr_08330 (holA)
03400 DNA repair and recombination proteins [BR:
pry03400
]
Prubr_08330 (holA)
Enzymes [BR:
pry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Prubr_08330 (holA)
DNA replication proteins [BR:
pry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Prubr_08330 (holA)
DNA repair and recombination proteins [BR:
pry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Prubr_08330 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BCJ63812
UniProt:
A0A810MS92
LinkDB
All DBs
Position
complement(915839..916858)
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AA seq
339 aa
AA seq
DB search
MSEPDPAGARATMSGVTSTGPAPIVLVLGDEELLANRAVAQTVTDARAVDPNLDVREYEA
GSVAPGEVAEMLSPSLFGGRRVLVLRAGQDARKDLVTVLLAYAKNPDPEVTLVVTHLGAA
KGKAFADGLRAAGAAVVPVPKVKKEKERIAFVRDEIRRGGGRCTEEAAEALVAAVGNDLR
ELAAACSQLLADTDGRIGADTVARYYRGRAEVSGFTVADAAMVGDVAAALEALRWALHVG
VDPVPIADAIADGVRTVARVVSAGRGSSYQMASSLGMPPWKVERAQRQGRGWSPEGLADA
MRAAAECNAAVKGGADDRAYALERAVFAVAAARHGSGGR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaacccgacccggccggggcccgtgcgacgatgtcgggcgtgacttccaccggt
cccgctccgatcgtgctcgtgctcggcgacgaggagctgctcgccaaccgtgcggtcgcc
cagaccgtcaccgacgcccgggcggtcgaccccaatctcgacgtacgggagtacgaggcc
ggctcggtcgcgcccggcgaggtggccgagatgctcagcccgtcgttgttcggcggacgg
cgggtgctggtcctgcgggccgggcaggacgcccgcaaggacctggtgacggtcctgctc
gcgtacgccaagaaccccgatcccgaggtcaccctcgtggtcacccacctcggcgcggcc
aagggaaaggcgttcgccgacgggctgcgcgccgccggtgcggccgtcgttccggtgccc
aaggtcaagaaagagaaggagcggatcgcgttcgtccgtgacgagatccggcgcggcggt
gggcgctgcaccgaggaagccgccgaggcacttgtcgccgcagtcggcaacgacctgcgc
gagctggccgccgcctgctcgcaactgctggccgacaccgacggtcggatcggtgccgac
accgtggcccgctactaccgggggcgcgccgaggtgagcgggttcaccgtcgccgacgcg
gcgatggtcggcgatgtcgccgccgcgctcgaagcactgcggtgggccctgcacgtcggg
gtcgatccggtgccgatcgccgacgccatcgccgacggggtccgtacggtggccagggtc
gtctcggccggccggggcagctcctaccagatggcgagcagtctcggcatgccgccgtgg
aaggtcgaacgggcccagcgtcaggggcgcgggtggagcccggaagggctcgccgacgcg
atgcgggccgccgccgagtgcaacgccgccgtcaagggcggtgccgacgaccgtgcgtac
gccctcgaacgggcggtcttcgcggtcgccgccgcccggcacggaagcggggggcgatga
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