Polymorphospora rubra: Prubr_16120
Help
Entry
Prubr_16120 CDS
T07190
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pry
Polymorphospora rubra
Pathway
pry03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Prubr_16120 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pry03021
]
Prubr_16120 (rpoC)
03400 DNA repair and recombination proteins [BR:
pry03400
]
Prubr_16120 (rpoC)
Enzymes [BR:
pry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Prubr_16120 (rpoC)
Transcription machinery [BR:
pry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Prubr_16120 (rpoC)
DNA repair and recombination proteins [BR:
pry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Prubr_16120 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BCJ64591
UniProt:
A0A810MU20
LinkDB
All DBs
Position
complement(1717254..1721141)
Genome browser
AA seq
1295 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVITSVDTEARHRDMSTVENEILAEKRQSENSRDSEIEKRAAKLEAD
LAELEAEGAKADVRRKVKEGGEREMRQIRDRAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALVQNMDLHAEADNLREIIRSGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERHR
PVVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTAGARGEGR
AFSSDAEARMAYDNGELHLQAPVKIRLHGVVGVDNGAGATKWTEPEDWTPGEPLTVETTL
GRVLFNETLPQGYRFVNYEIRKGQLSAIVNDLAERFPKVALAATLDGLKEAGFHWATWSG
VTIGMEDVIAPPRKREILERYESDADRIDKQYQRGLMTAEERRGELIEIWTKATGEVAKE
METALPQENPLWKMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPIKASYREGLSVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMQVGEYLDGK
LVVHEHAETGVHARTIADDIKGADGTLVVERGADLNSILVDKLVAAGVETVRVRSVLTCE
SKLGVCGACYGRSLPTGKTVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQGL
PRVQEIFEARVPKGKAPIADTPGRIRIEDGERSRKIIIVPDDGSDEIVHDKISKRVRLRA
HDGDRVEVGEKLTEGTIDPHELLRILGPRAVQVHLTQEVQEVYRSQGVLIHDKHIEIIIR
QMLKRVTVIDSGATEFLPGVLVDRALFESENRRLVSEGGEPAAGRPVLMGITKASLATDS
WLSAASFQETTRVLTDAAINARSDSLIGLKENVIIGKLIPAGTGISKYRNIRVEPTEEAK
AKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcgcattggcctggccaccgcagacgacatc
cgtcagtggtcgcacggcgaggtcaagaagcctgaaacgatcaactaccgcactctgaag
ccggaaaaggacgggctcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccggtccaaggtgcggcgtgagcggatgggccacatcgagctggccgcctcc
gtgacccacatctggtacttcaagggcgtcccgagccggctgggctacctgctcgacctg
gcccccaaggacctcgaaaagatcatttacttcgcctcgtacgtgatcaccagcgtcgac
accgaagcgcggcaccgggacatgtccaccgtcgagaacgagattctcgccgagaagcgg
cagtcggagaacagccgcgactcggagatcgagaagcgggccgccaagctggaggccgac
ctcgccgagctggaggccgaaggcgccaaggccgacgtacgccgcaaggtcaaagagggc
ggcgagcgcgagatgcgccagatccgcgaccgggcccagcgggagatcgaccggctggac
gaggttctcgacaccttccggaagctggattccaagcagctggtcaccgacgagctgctc
taccgcgagctgcgggaccggttcggcgagtacttcaccggtggcatgggtgccgaggcg
atcaaggcgctggtccagaacatggacctgcacgccgaggccgacaatctgcgcgagatc
atccggtccggcaagggccagcggaagatccgggcgctcaagcggctcaaggtcgtcgcg
gcgttcctcaacacccgcaactccccgctcggcatggtgctcgactgcgtaccggtgatc
ccgccggacctgcggccgatggtccagctcgacggtggccggttcgccacctcggacctc
aacgacctctaccgtcgggtgatcaaccgcaacaaccggctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggccggccggtcaccggcccgggtaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggtcggttccggcagaacctgctcggcaag
cgcgtcgactactccggccgctcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcggcaccgt
ccggtcgtgtgggacgtgctggaagaggtcatcggcgagcacccggtgctgctcaaccgg
gcaccgacgctgcaccggctgggcatccaggccttcgagccgcagctggtcgagggcaag
gcgatccagatccacccgctcgtctgcaccgccttcaacgccgacttcgacggtgaccag
atggcggtccacgtgccgctgtccgccgaggcgcaggccgaggcgcggatcctgatgctg
tcgtccaacaacatcctcaagcccgcggacggcaagccggtcaccatgccgacccaggac
atggtcatcggcctctaccacctcacccacctcaccgcgggtgcgcgtggcgagggccgg
gcgttcagttcggacgccgaggcccggatggcgtacgacaacggtgaactgcacctgcag
gcaccggtgaagatccgcctgcacggcgtcgtcggggtcgacaacggcgccggcgcgacc
aagtggaccgagccggaggactggacgccgggcgagccgctgacggtcgagacgacgctg
ggccgggtgctgttcaacgagacgctgccgcagggctaccgcttcgtgaactacgagatc
cgcaagggtcagctgtcggcgatcgtcaacgacctcgccgagcggttcccgaaggtggcg
ctggccgcgaccctcgacgggctcaaggaggccggtttccactgggccacctggtcgggt
gtcacgatcggcatggaggacgtcatcgctccgccgcgcaagcgggagatcctggagcgg
tacgagtccgacgccgaccggatcgacaagcagtaccagcggggtctgatgaccgccgag
gagcgtcgcggcgagctcatcgagatctggaccaaggcgaccggcgaggtcgccaaggag
atggagaccgcgctgccgcaggagaacccgctgtggaagatgatcaactcgggtgcccgc
ggtaacctgctccagcttcgccagatcgccgcgatccgtggtctggtggccaacccgaag
ggtgagatcatcccgcggccgatcaaggccagctaccgggagggtctgtccgtgctggag
tacttcatctccacgcacggtgcccgtaagggtctcgccgacaccgcgctgcggaccgcc
gactcgggttacctgacccgtcgtctggtcgacgtctcccaggacgtcatcatccgcgaa
gaggactgcggcacggaccgggcgatcccgatgcaggtcggcgagtacctcgacggcaag
ctggtggtccacgagcacgccgagaccggcgtacacgcccggaccatcgccgacgacatc
aagggcgccgacggcaccctggtggtcgagcggggcgcggacctcaactcgatcctggtc
gacaagctcgtcgccgccggcgtcgagacggtacgggtacgcagcgtgctcacctgcgag
tcgaagctgggtgtctgcggtgcgtgctacggccgctcgctgccgaccggcaagaccgtc
gacgtgggcgaggcggtcggcatcatcgccgcccagtccatcggtgagccgggtacgcag
ctgaccatgcgtaccttccacaccggtggtgtcgccggtgaggacatcacccagggtctg
ccccgtgtccaggagatcttcgaggcgcgggtgccgaagggcaaggcgccgatcgccgac
accccgggccggatccggatcgaggacggcgagcgttcgcggaagatcatcatcgtgccg
gacgacggcagcgacgagatcgtccacgacaagatctccaagcgggtccgcctgcgggcc
cacgacggagaccgcgtcgaggtcggcgagaagctcaccgagggcaccatcgacccgcac
gagctgctgcgcatcctcggcccgcgcgcggtccaggtccacctgacccaggaggtccag
gaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatccgc
cagatgctcaagcgggtcacggtgatcgactccggcgcgaccgagttcctgccgggtgtg
ctggtcgaccgggcactgttcgagtcggagaaccgccggctcgtctccgagggcggcgag
cccgcggccggacgtccggtgctgatgggtatcaccaaggcgtcgctggccaccgactcg
tggctgtcggcggcctccttccaggagaccacccgggtgctgaccgatgcggcgatcaac
gcgcgcagcgactcgctcatcggcctgaaggagaacgtcatcatcggaaagctcatcccg
gccggtaccggcatcagcaagtaccgcaacatccgggtcgagcccaccgaggaggcgaag
gccaaggtctactcgatgaccggataccccgagaccgactacggattcgggccggccagc
gggcaggccgtgccgctggacgacttcgacttcgggtcgtaccgctag
DBGET
integrated database retrieval system
