Polymorphospora rubra: Prubr_16730
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Entry
Prubr_16730 CDS
T07190
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pry
Polymorphospora rubra
Pathway
pry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Prubr_16730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pry03019
]
Prubr_16730
03400 DNA repair and recombination proteins [BR:
pry03400
]
Prubr_16730
Enzymes [BR:
pry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Prubr_16730
Messenger RNA biogenesis [BR:
pry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Prubr_16730
DNA repair and recombination proteins [BR:
pry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Prubr_16730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
PglZ_C
Motif
Other DBs
NCBI-ProteinID:
BCJ64652
UniProt:
A0A810MUI0
LinkDB
All DBs
Position
complement(1784669..1786807)
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AA seq
712 aa
AA seq
DB search
MDTGRTAVREQAEAVLRRLAGDGARLRDDQWRAIEALVVDKRRVLCVQRTGWGKSAVYFV
ATALLRAADAGRSAGPTVIVSPLLALMRNQVEAAARAGITARTINSANLDEWQQITDEIN
AGAVDVLLVSPERLNNPEFRDSVLPRLAATTGLLVVDEAHCVSDWGHDFRPDYRRLRTFL
ANLPAGTPVLATTATANARVTDDVAEQLGDALVLRGSLDRDSLRMAVLDLPSPAHRLGWL
ADQLDRLPGSGIVYTLTVAAAGETAEFLRSRGYPVAAYTGQAEDADRRAAEQDLLDNKIK
ALVATSALGMGFDKPDLGFVVHLGAPPSPIAYYQQVGRAGRAVRHAEVLLLPGAEDQAIW
RYFASLAFPPQEQVRSVLAALERADRPLSTPALEPIVDLRRARLELMLKVLDVDGAVRRV
RGGWVATGEPWVYDTARLERVAAARTAEQQAMREYAATTGCRMEFLRRCLDDPGATPCGR
CDRCAGPQFDAAVSAPALAAAQAFLGRPGVQIPPKKLWPTGLEAIGVPLRGKLGPAEQSA
PGRAVGRLSDLGWGGRLRALVGPGASDGPVPDDVFGAVVEVLKDWAHGDERWPGRPVGVV
AVGSRQRPRLVGSLAERVASVGRLPLLGTVTATGAGAPAGAAARGNSAQRVRGLHGAFAV
PDGLAGALDGLAGPVLLVDDLVDSGWTMAMVGRLLRQAGAPAVLPLALAVAG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtggacaccgggcgtacggcggtacgcgagcaggccgaggcggtgctgcgccggctcgcc
ggagacggtgcgcgactgcgcgacgaccagtggcgggcgatcgaggcgctggtcgtcgac
aagcgccgggtgctgtgcgtgcaacgcaccgggtgggggaagtcggcggtctacttcgtc
gcgaccgcgctgctgcgcgccgccgacgccggccggagcgccgggccgacggtcatcgtc
tcgccgctgctggcgctgatgcgcaaccaggtcgaggcggccgcccgggccgggatcacc
gcccgcacgatcaactcggcgaacctcgacgagtggcagcagatcaccgacgagatcaat
gccggtgccgtcgacgtactgctggtcagtcccgagcggctcaacaacccggagttccgg
gactcggtgctgccccgcctggcggcgaccaccgggctgctcgtcgtcgacgaggcgcac
tgcgtctccgactggggacacgacttccgccccgactaccggcggttgcgcaccttcctg
gccaacctgccggccggcaccccggtgctggccaccacggcgaccgccaacgcccgggtc
accgacgacgtcgccgagcagttgggcgacgcgctggtgctgcgcgggagcctcgaccgg
gactcgctgcggatggccgtactcgatctgccgagcccggcgcaccggctcggctggctg
gccgaccagctcgaccggctgcccgggtcgggcatcgtctacacgctgaccgtggcggcg
gccggcgagacggcggagttcctgcggtcccgcggctacccggtggcggcgtacaccggc
caggccgaggacgccgaccgtcgggccgccgagcaggacctgctcgacaacaagatcaag
gcgctggtggccacgtcggcgctcggcatgggcttcgacaagcccgatctcggcttcgtc
gtgcacctcggcgccccgccgtcgccgatcgcctactaccagcaggtggggcgggccggc
cgggccgtccggcacgccgaggtgctgctcctgcccggtgccgaggaccaggcgatctgg
cgctacttcgcgtcgctggccttcccgccgcaggaacaggtccggtcggtgctcgccgcc
ctggagcgggccgaccggccactgtcgacaccggccctcgaacccatcgtcgacctgcgt
cgggcccgcctggagctgatgctcaaggtcctcgacgtcgacggtgcggtccgccgggtc
cgtggcggctgggtcgccaccggcgagccgtgggtctacgacaccgcccggctggagcgg
gtcgccgccgcccgcaccgccgagcagcaggcgatgcgggagtacgcggccaccaccggc
tgccggatggagttcctgcgtcgctgcctcgacgaccccggcgcgacaccgtgcgggcgc
tgtgaccggtgtgccggaccgcagttcgacgccgccgtgtcggcgccggcactcgccgcc
gcgcaggcgttcctcggtcgccccggggtgcagatcccgccgaagaagctgtggccgacc
gggctggaggcgatcggcgtaccgctgcgcggcaagctggggcccgccgagcagtcggcg
cccggccgggccgtggggcggctgtccgacctcgggtggggcggccggctgcgggcactc
gtcggccccggagcgagcgacggcccggtgcccgacgacgtgttcggcgcggtcgtcgag
gtgctcaaggactgggcgcacggggacgagcgctggcccgggcgcccggtgggcgtcgtc
gccgtcggatcgcggcagcggccccggctggtcggcagcctcgccgagcgggtcgcgtca
gtgggccggctgccgctgctcggcacggtcaccgcgaccggtgccggcgcaccggccggt
gcggccgcgcgcggcaacagcgcccaacgcgtacgcgggctgcacggcgccttcgccgtc
cccgacgggctggcgggggccctcgacgggctggccggtccggtgctgctcgtcgacgac
ctggtcgactcgggctggacgatggcgatggtgggccggctgctccgccaggccggtgcc
ccggccgtcctgccgttggcgctcgccgtcgccggctga
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