Polymorphospora rubra: Prubr_20420
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Entry
Prubr_20420 CDS
T07190
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pry
Polymorphospora rubra
Pathway
pry03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Prubr_20420
09124 Replication and repair
03420 Nucleotide excision repair
Prubr_20420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pry03021
]
Prubr_20420
03400 DNA repair and recombination proteins [BR:
pry03400
]
Prubr_20420
Enzymes [BR:
pry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Prubr_20420
Transcription machinery [BR:
pry03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Prubr_20420
DNA repair and recombination proteins [BR:
pry03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Prubr_20420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCJ65021
UniProt:
A0A810MV50
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All DBs
Position
2178866..2180545
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AA seq
559 aa
AA seq
DB search
MNGGPLIVQSDKTLLLEVDHPDAQACRIAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEGVVDALIKFSRYPVPHALLVDVAETMDRYGRLQLANHPTHGLVLRALDRMVLIEVA
KSKKLAGMIGAKVDDDTLIVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHPIDLAEAGK
DGRPAWTLRSYQREAVDTFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAG
RQWKRELVARTSLTEDEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFNARDWGL
VIYDEVHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEA
QGWIAPAECTEVRVTLTDAERMGYAVAEPEERYRVAATARTKLPVVRRLVERHHGEQVLV
IGAYIEQLHQLGEFLDAPIVQGSTTNKERERLFDAFRSGEVSTLVISKVGNFSIDLPEAA
VAIQVSGTFGSRQEEAQRLGRVLRPKSDGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGY
AYTIVDADDVLGPPLPSTD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcggcccgctgatcgtccagtccgacaagacgctcctgctggaggtcgaccac
cccgacgcacaggcctgccggatcgcgatcgcgccgttcgccgaactggagcgctcgccc
gagcacgtgcacacctaccggctgacgccgctcgggctctggaacgcccgcgccgccggg
cacgacgccgaaggcgtggtcgacgccctgatcaagttctcccgctatccggtgccgcac
gcgctgctggtcgacgtcgccgagaccatggaccggtacggccggctgcaactggccaac
caccccacgcacggtctggtgctacgcgccctggaccggatggtgttgatcgaggtggcg
aagagcaagaagctcgccggcatgatcggcgccaaggtcgacgacgacaccctgatcgtg
cacccgtccgaacgtgggcggctcaagcaggcgctgctcaaactcggctggcccgccgag
gacctggccggttacgtggacggcgaggcgcatccgatcgacctcgccgaggccggcaag
gacggccggccggcctggacgctgcggtcgtaccagcgggaggcggtcgacaccttctgg
gccggcggctccggcgtggtcgtactgccctgtggggccggcaagacactggtcggcgcg
gcggcgatggccgaggcgaaggcgaccacgctgatcctggtcaccaacaccgtcgccggc
cggcagtggaagcgggaactggtcgcccggacctcgttgaccgaggacgagatcggcgag
tactccggggaacgcaaggagatccggccggtcaccatcgcgacgtaccaggtgctgacc
tcgcggcgcggcggcgccttcacccacctggacctcttcaacgcccgcgactggggcctg
gtcatctacgacgaggtgcacctgctgccggcgccgatcttccggttcaccgccgacctc
caggcccgccgccggctcggcctgaccgcgaccctggtacgcgaggacggccgcgagggc
gacgtgttctcgttgatcggcccgaagcgctacgacgcgccgtggaaggacatcgaggcg
cagggctggatcgccccggccgagtgcaccgaggtacgggtcacgctgaccgacgccgaa
cggatggggtacgccgtcgccgaaccggaggagcgctaccgggtggcggcgacggcgcgt
acgaagctgcccgtggtccgccgcctggtcgagcggcaccacggcgagcaggtgctggtc
atcggcgcctacatcgagcagttgcaccaactcggcgagttcctcgacgcgccgatcgtg
cagggttcgacgaccaacaaggagcgggaacggctcttcgacgcgttccgctccggcgag
gtgtcgaccctggtgatctccaaggtgggcaacttctcgatcgacctgccggaggcggcg
gtggcgatccaggtctccggcacgttcggatcccggcaggaggaggcgcagcgactcggg
cgggtgctgcgaccgaagtccgacggccggcaggcacacttctacacggtggtctcccgg
gacacgatcgacaccgagtacgccgcacaccggcagcggttcctggccgagcaggggtac
gcgtacacgatcgtcgacgccgacgacgtgctcggcccgccgctgccgtcgaccgactga
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