Polymorphospora rubra: Prubr_39680
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Entry
Prubr_39680 CDS
T07190
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pry
Polymorphospora rubra
Pathway
pry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Prubr_39680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pry03400
]
Prubr_39680
Enzymes [BR:
pry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Prubr_39680
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Prubr_39680
DNA repair and recombination proteins [BR:
pry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Prubr_39680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Fapy_DNA_glyco
H2TH
Ribonuclease_3
dsrm
zf-FPG_IleRS
RM44_endonuclase
DSRM_2
TackOD1
Motif
Other DBs
NCBI-ProteinID:
BCJ66947
UniProt:
A0A810N0P0
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All DBs
Position
4270333..4272072
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AA seq
579 aa
AA seq
DB search
MSNDKRRRPPVGHLEAAFGISLDPELLERALTHRSFAYENGGLPTNERLEFLGDSVLGVV
ITAALFHNHPDLPEGQLAKLRASVVNMRALADVARGLGPQGLGPYLLLGKGEETTGGRDK
ASILADTLEALLGAIYLQYGLDTASIVIHRLFDPLMADSAGRGAALDWKTSLQELTAALG
VGVPEYRIDDAGPDHAKTFTAWVVVAGQRYGGAEGRSKKEAEQRAAEAAWRTLSEQVAEP
TEVPPDQPTTAPDAAAPTGPAGRPRRRASPFRRPVPCRRRPTGCRSRIRTRPAADVPELP
EVETVRQGLARWVTGRRFAVVDVRHPRAIRRHLPGAAHFAAVLAGRQVVDVRRRGKYLWL
PLDSGDAVIGHLGMSGQLLMQPAGTPDETHLRIRFTFDDGGPELRFVDQRTFGGLSYSEG
GADLPTEIAHIARDPMDPEFSDTAFVAAIRRRRTEVKRALLDQTLISGVGNIYADEALWR
ARLHGLRPTAALTGPAVIRLLGHVRDVLGAAIKAGGTSFDALYVDVNGESGYFDRSLDVY
GREGLPCHRCGAPIRREPFMNRSSFSCPRCQPRPRLPRP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacaagcggaggcggccaccggtcggccacctggaggctgccttcgggatc
tccctcgaccccgaactgctggaacgggccctgacccaccgctcgttcgcgtacgagaac
ggtggcctgccgaccaacgagcgcctggagttcctcggcgactcggtgctcggtgtggtg
atcacggcggcgctgttccacaaccacccggacctgcccgaggggcagctcgccaagctg
cgggccagcgtggtcaacatgcgtgcgctcgccgacgtcgcccgtggcctcggtccgcag
ggcctcgggccgtacctgctgttgggcaagggtgaggagaccaccggcggccgggacaag
gcgagcatcctcgccgacaccctggaggcgctgctcggcgcgatctacctccagtacggg
ctggacaccgcctcgatcgtgatccaccggctgttcgacccgctgatggcggactccgcc
ggccgcggcgcggccctggactggaagaccagcctccaggagctgaccgccgcgctcggg
gtcggggtgccggaataccggatcgacgacgccggcccggaccacgccaagacgttcacc
gcctgggtggtggtcgccggccagcggtacggcggcgccgagggccgcagcaagaaggag
gccgagcagcgggccgccgaggcggcctggcggacgctgtcggagcaggtcgccgagccg
accgaggtcccgccggaccagccgaccacggcacccgacgcggcggccccgaccggcccg
gcggggcgcccgcgccggagggcgagcccgttccggcggccggttccgtgccggcgtcgg
ccgacggggtgtcgatcccggatccggacccgtccggcagccgacgtgcctgagctgccc
gaggtcgagacggtccggcaggggctggcccggtgggtgaccggccggcggttcgccgtc
gtcgacgtacggcatccacgggcgatccgccggcacctgcccggtgccgcacacttcgcg
gcggtgctcgccggccggcaggtggtcgacgtccgccgccggggaaagtacctgtggctg
ccgctggacagcggcgacgcggtgatcgggcacctcggcatgtcggggcagctgctgatg
cagccggcgggcacgcccgacgagacacacctgcggatccggttcaccttcgacgacggc
ggccccgaactccgcttcgtcgaccagcgtacgttcggcgggctgtcgtactccgagggc
ggcgccgacctgccgacggagatcgcgcacatcgcccgcgacccgatggatccggagttc
tccgacacggcgttcgtcgccgcgatccggcggcgccggaccgaggtgaagcgggccctg
ctcgaccagacactgatctccggcgtcggcaacatctacgccgacgaggcgctgtggcgg
gcccggttgcacgggttgcggccgaccgccgcactgaccggaccggcggtcatccggctg
ctcgggcacgtacgcgacgtgctgggtgcggcgatcaaggccggcggcaccagcttcgac
gccctgtacgtcgacgtgaacggcgagagcggctacttcgaccggtcgctcgacgtgtac
ggccgggaggggctgccgtgccaccggtgcggcgctccgatccgccgtgagccgttcatg
aaccggtcctccttcagctgcccacgctgccagccccgcccacgcctgccccggccctga
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