Polymorphospora rubra: Prubr_41460
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Entry
Prubr_41460 CDS
T07190
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pry
Polymorphospora rubra
Pathway
pry00300
Lysine biosynthesis
pry00470
D-Amino acid metabolism
pry01100
Metabolic pathways
pry01110
Biosynthesis of secondary metabolites
pry01120
Microbial metabolism in diverse environments
pry01230
Biosynthesis of amino acids
Module
pry_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Prubr_41460 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Prubr_41460 (dapF)
Enzymes [BR:
pry01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Prubr_41460 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BCJ67125
UniProt:
A0A810N6R1
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Position
4482744..4483589
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AA seq
281 aa
AA seq
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MQFTKGHGTGNDFVILDDPEGRLRLTPELAAALCDRRRGIGGDGVLRVVRAANHPAAARY
ADRAEWFMDYWNSDGSLAEMCGNGVRVFTRYLSSIGVTGSPDTGLPVATRAGVVRALVGP
DEIAVDMGRPRVYDTSTATLDGLVLPGAAVDCGNPHLVCALPPDVDLAALDLTRAPGFDR
ALFPAGVNVEFVTPGEPVAGTDLHTLMRVYERGSAETLSCGSGACAVGAVALRDAGLDTG
VVAVDVPGGRLTVTIDESTCWLAGPAVLVAHGEVDEDALPR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttcaccaaaggccacggcaccggcaacgacttcgtgatcctcgacgacccggag
gggcgcctccggctcacgccggaactcgccgccgccctgtgcgaccgacgccggggcatc
ggcggtgacggcgtactgcgggtcgtccgggccgccaaccacccggccgcggcccggtac
gccgaccgggccgagtggttcatggactactggaactccgacggctcgctggccgagatg
tgcggcaacggcgtacgcgtcttcacccgctacctgtcgtcgatcggcgtgaccggctcg
ccggacaccggcctgccggtggcgacccgggccggcgtcgtgcgcgcgctcgtcgggccc
gacgagatcgccgtcgacatgggccgaccccgggtgtacgacaccagcaccgcgaccctc
gacgggctggtgctgcccggcgcggccgtcgactgcggcaacccgcacctggtctgcgcc
ctgccccccgacgtcgacctggccgcgctcgacctcacccgggcgcccggattcgaccgg
gcactgttcccggccggggtcaacgtcgagttcgtgacgcccggcgaaccggttgccggc
accgacctgcacaccctgatgcgggtctacgaacgcggctcggccgagaccctgtcgtgc
gggtcgggcgcctgcgcggtcggcgcggtggcgctgcgcgacgccgggctggacaccggc
gtggtggcggtcgacgtgccgggcggccggctgaccgtcacgatcgacgagtcgacctgc
tggctggccggccccgccgttctggtcgcccacggcgaggtcgacgaggacgccctcccg
cgctga
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