Polymorphospora rubra: Prubr_48130
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Entry
Prubr_48130 CDS
T07190
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pry
Polymorphospora rubra
Pathway
pry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Prubr_48130 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pry03019
]
Prubr_48130 (recQ_2)
03400 DNA repair and recombination proteins [BR:
pry03400
]
Prubr_48130 (recQ_2)
Enzymes [BR:
pry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Prubr_48130 (recQ_2)
Messenger RNA biogenesis [BR:
pry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Prubr_48130 (recQ_2)
DNA repair and recombination proteins [BR:
pry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Prubr_48130 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
HTH_24
TrmB
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
BCJ67792
UniProt:
A0A810N2V6
LinkDB
All DBs
Position
complement(5217828..5219465)
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AA seq
545 aa
AA seq
DB search
MKLPLHSTRLRRVARQHFGWRSLRPGQLSAMRALMKRRDALVVLPTGAGKSAVYQVPATL
LAGPTVVVSPLLALQQDQIIALNERGDPRLRAVRVSSAETPGQQAAALEDLRTGRARFLF
ITPEQLNRPDRLAEVKALRPALVAVDEAHCISAWGHDFRPDYLALGHLIRGIGRPPVVAL
TATASPPVRDDIVDRLGLSDPRTVVSGLDRPNLFLEVGHCPTEDYRWRRLLALLDAEERP
GVIYVATRRAAEELAGQLTTAGHPAAHYHGGMAAGARERLHGDFLADRVPIMVATSAFGM
GIDKPNIRWVAHVALPDSPDSYLQEIGRAGRDGRPARALLLWRAEDVGIQRYFTGGGPDE
TDLRDLAALLRDGPATKAELRERSGLSARKLGQLLALLEQVGAAATRAGNRLASPRYAPE
PADAARTALAEAERQQAVQRSRTDMMRAFAEHGGCRGQTLLAYFGEHMKKVCGHCDNCHA
GNSTADDGSSGPFPVHSTVRHAEWGSGMVLGYEDDRMTVLFDDVGYKTLSVPVVSEQGLL
AREAG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccactgcactcgacccggctgcgccgcgtcgcccgacagcacttcggttgg
cggtcgctgcgacccggtcagctgtccgccatgcgggccctgatgaagcgccgcgacgcg
ctcgtcgtcctgccgacgggagccggcaagtccgccgtctaccaggttccggccacgctg
ctggccggaccgacggtcgtggtctcgccgctgctcgccctgcaacaggaccagatcatc
gcgctcaacgagcggggcgacccgcggctgcgggcggtgcgggtcagctcggccgagacg
cccggccagcaggccgccgcgctcgaggatctgcgtaccggccgggcccggttcctgttc
atcacgcccgagcagctgaaccggccggaccggctggccgaggtcaaggcgctgcgaccg
gcgctggtcgcggtcgacgaggcgcactgcatctcggcctggggacacgacttccggccc
gactacctggccctggggcatctgatccgcggcatcggccggccgccggtggtcgccctg
accgccaccgcgtccccgccggtacgcgacgacatcgtcgaccggctgggcctgtccgac
ccgcggaccgtggtgtccgggctggaccggccgaacctgttcctcgaggtcggccactgc
cccaccgaggactaccgctggcgccggctgctcgcgctgctcgacgccgaggagcgaccc
ggcgtgatctacgtcgccacccgccgggcggccgaggaactggccggccaactgaccacg
gccggccacccggccgcgcactaccacggcggaatggccgccggcgcgcgggaacggctg
cacggggacttcctcgccgaccgggtgccgatcatggtggcgacgtcggcgttcggcatg
ggcatcgacaaaccgaacatccggtgggtggcgcacgtggccctgcccgactccccggac
agctacctgcaggagatcggccgggccggccgggacggccggccggcgcgggcgttgctg
ctgtggcgggccgaggacgtcggcatccagcggtacttcaccggcggcggcccggacgag
accgacctgcgcgacctcgccgcgctgctgcgcgacgggccggcgacaaaagccgagcta
cgcgaacgcagcggattgagcgcccgcaagctgggtcagctgctcgccctgctggagcag
gtcggcgccgccgccacccgggccggcaaccggctcgccagcccccggtacgccccggaa
ccggcggacgcggcccggacggcgctcgccgaggcggagcggcagcaggcggtgcaacgc
tcgcgtacggacatgatgcgtgccttcgccgagcacggtggctgccgggggcagacgctg
ctggcgtacttcggtgagcacatgaagaaggtctgtgggcactgcgacaactgccacgcc
ggcaacagcaccgccgacgacgggtcgagcgggccgttcccggtgcacagcacggtgcgg
cacgccgagtggggcagcggcatggtgctcggctacgaggacgaccggatgacggttctc
ttcgacgacgtcggctacaagacgctgtcggtgccggtggtcagcgagcaggggctgctg
gcccgcgaggcgggctga
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