Polymorphospora rubra: Prubr_68040
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Entry
Prubr_68040 CDS
T07190
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pry
Polymorphospora rubra
Pathway
pry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Prubr_68040 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pry03019
]
Prubr_68040 (cshA)
03009 Ribosome biogenesis [BR:
pry03009
]
Prubr_68040 (cshA)
Enzymes [BR:
pry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Prubr_68040 (cshA)
Messenger RNA biogenesis [BR:
pry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Prubr_68040 (cshA)
Ribosome biogenesis [BR:
pry03009
]
Prokaryotic type
rRNA helicases
Prubr_68040 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WSD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCJ69783
UniProt:
A0A810NE68
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All DBs
Position
7597833..7599485
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AA seq
550 aa
AA seq
DB search
MSGAPPSDVVAAAAKQWEREHMDDATGFAELGLRPELVRAISALGYEEPTPIQREAIPPL
VDGRDLLGQAATGTGKTAAFALPLLHRMRGDGGGPGPDALVLVPTRELAIQVCEAVHRYG
RDLGARVLPIYGGQPIVRQLRALERGVDVVVATPGRALDHIGRGTLDLSGIRTVVLDEAD
EMLDMGFAEDIEAILQDVPEQRQTVLFSATMPPRIDALARSHLRDEVRIQIGREPAPAGE
TPKVRQAAYLVARAHKPAALGRVLDVEAPTAAIVFCRRRDEVDELTETLNGRGYRAEALH
GGMSQEQRDRVMTRLRNGTADLLVATDVAARGLDIEQLTHVVNYDVPSAPESYVHRIGRV
GRAGREGVAITLAEPREHGMLRTIERVTRQRIMMEKVPSTADLRARRLELTRAALHESIL
EDDLSRFRVVVESLTDEFDIMDVALAAVKLAHEASGAAADEEEIPEVAVQARPAGRGRPR
PGGREERRGRAPAEGMTRLFVSAGRSAGSARRTWSGRSPGSRSCPAATSARSRSPTGSRW
SRCRSRRRAT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggcgccgccgagcgatgtggtggccgccgccgcgaagcaatgggaaagggaa
cacatggacgacgcgaccggcttcgccgaactgggactgcggccggaactggtgcgcgcg
atctccgctctcggctacgaggaacccaccccgatccagcgggaggcgatcccgccgctg
gtcgacggccgtgacctgctcggacaggcggcgaccggcaccggtaagacggcggcgttc
gcgctgccgctgctgcaccggatgcggggcgacggtggcggcccggggccggacgcgttg
gtcctggtgcccacccgggaactggccatccaggtctgcgaggcggtgcaccgctacggc
cgcgacctcggcgcgcgggtgctgcccatctacggcggacagccgatcgtacggcagttg
cgggccctcgaacgcggtgtggacgtggtcgtggccacacccggccgggcactcgaccac
atcgggcgcggcaccctggacctgtccgggatccggacggtggtgctcgacgaggccgac
gagatgctcgacatgggattcgccgaggacatcgaggcgatcctccaggacgttccggag
cagcggcagacggtgctcttctcggccacgatgccgccccggatcgacgcgctggcccgc
agtcacctgcgcgacgaggtccggatccagatcggacgcgagccggcgccggccggggag
acgccgaaggtgcggcaggccgcctacctggtcgcccgggcccacaagccggccgcgctg
ggccgggttctcgacgtcgaggcgccgaccgcggcgatcgtgttctgccggcgccgcgac
gaggtcgacgagctgaccgagaccctcaacgggcgcggctaccgggccgaggcgctgcac
ggcgggatgagccaggagcagcgtgaccgggtgatgacccggctgcgcaacggcaccgcc
gacctgctggtggcgaccgacgtcgcggcccgcggcctggacatcgagcagctcacccac
gtggtcaactacgacgtgccgtcggcgccggagtcgtacgtgcaccggatcggccgggtg
ggccgggccggtcgtgagggggtggcgatcaccctggccgagccgcgtgagcacggcatg
ctgcgcaccatcgagcgggtgacccggcagcggatcatgatggagaaggtgccgtcgacc
gcggacctgcgggcgcggcggctggagctgacccgggcggcgctgcacgagagcatcctg
gaggacgacctcagccggttccgggtcgtcgtcgagtcgctgaccgacgagttcgacatc
atggacgtggcgctggcggcggtgaagctggcgcacgaggcgagcggtgccgcggccgac
gaggaggagatcccggaggtcgcggtccaggcccggccggccggtcggggccggccgcgt
cccggcggccgggaggagcggcggggtcgggcgcccgcggagggcatgacccggctgttc
gtcagtgccggccggagcgcgggatccgcccgcaggacctggtcggggcgatcgccgggg
agtcgcagttgtccggccgcgacatcggcgcgatcgagatcgccgaccggttctcgctgg
tcgaggtgccggagtcggcggcgcgcgacgtga
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