Polymorphospora rubra: Prubr_72790
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Entry
Prubr_72790 CDS
T07190
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pry
Polymorphospora rubra
Pathway
pry00040
Pentose and glucuronate interconversions
pry01100
Metabolic pathways
pry02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Prubr_72790
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Prubr_72790
Enzymes [BR:
pry01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Prubr_72790
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
BCJ70258
UniProt:
A0A810NEE1
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Position
8136460..8138010
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AA seq
516 aa
AA seq
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MRLLAATATAAVGAVIVVALPNPQASAATGTVTGYATQNGGTTGGRGGQTVRATTGTAIH
AALCNRASSSTPIIIQVEGTINHGNTTKVSGPSCNTAAGVIELKQISNVSIIGVGGGAVF
DQLGIHIREASNIVIQNVTVRNVKKSGSPTSNGGDAIGMESDVRNVWVDHVTLEASGGES
EGFDGLFDMKDNVQYVTLSYSILRNSGRGGLIGSSESDRSNGFVTYHNNLYENIDSRTPL
LRGGISHIYNNHYVSIHESGINSRAGGRAKVENNYFKNAKDVLGTFYTSERGYWQVAGNI
FDNVTWSSQGSDNYPAGPNPQSNTTVSIPYSYRLDGANCVPNIVQQTAGANKGLRVSDGN
CTPTNPTPNPTNPTPNPTTPTPGPTTPTPGPSQPSGTNLSLGAGADGSSKASGTSYGNVT
DGNVSSYWSPSGSTGDISVKWGSATRVGRVVIREASGAVGNIGAWQLINHDTGAVLTSGT
GAGTATFSATSLKKITFRITGSNGAPRVAEFETYAG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcgactactggcggcaacggccacggccgccgtcggagccgtgatcgtcgtggcgctg
ccgaatccccaggcgtcggcggcgacgggcaccgtcaccggctacgcgacccagaacggt
gggaccaccggcgggcggggcggacagacggtacgggccaccacgggaaccgcgatccac
gccgccctgtgcaaccgggccagtagcagcaccccgatcatcatccaggtcgagggcacc
atcaaccacggcaacaccaccaaggtgtccggcccgagctgcaacaccgccgccggcgtg
atcgagctcaagcagatcagcaacgtctcgatcatcggcgtcggcggcggagccgtcttc
gaccagctcggcatccacatccgcgaggccagcaacatcgtcatccagaacgtgaccgtc
cggaacgtcaagaagtcgggttcccccacgtcgaacggcggtgacgccatcggcatggag
agcgacgtccgcaacgtctgggtcgaccacgtcaccctggaggcctcgggtggcgagtcg
gagggcttcgacggcctcttcgacatgaaggacaacgtccagtacgtgaccctgtcctac
agcatcctgcgcaactccggccggggtggcctgatcgggtccagcgagagcgaccgctcg
aacggcttcgtcacctaccacaacaacctgtacgagaacatcgactcccgtacgcccctg
ctgcgcggcggcatctcccacatctacaacaaccactacgtgagcatccacgagtccggc
atcaactcgcgcgccggtggccgcgccaaggtggagaacaactacttcaagaacgccaag
gacgtcctcggcaccttctacaccagcgagcgcggctactggcaggtcgccggcaacatc
ttcgacaacgtgacctggtcgagccagggcagcgacaactaccccgccggccccaacccg
cagtccaacaccaccgtcagcatcccgtactcctaccggctcgacggggccaactgcgtg
ccgaacatcgtgcaacagacggccggcgccaacaagggcctgcgggtctcggacggcaac
tgcacgccgaccaaccccaccccgaatccgaccaacccgacgccgaacccgaccacgccg
accccgggcccgaccacgcccaccccgggtccgagccagcccagcgggaccaacctcagc
ctcggcgccggcgccgacggctccagcaaggccagcgggacgagctacggcaacgtgacg
gacggcaacgtcagctcgtactggtcgccgtccggctcgaccggtgacatctcggtcaag
tggggttcggccaccagggtgggccgggtcgtcatccgcgaggcgtcgggcgccgtgggc
aacatcggggcctggcagctcatcaaccacgacaccggagccgtcctgacctcgggcacc
ggggcgggcaccgccaccttctcggcgacctcgttgaagaagatcaccttccggatcacc
ggttcgaacggcgctccccgggtcgccgaattcgagacctacgccggctga
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