Paenibacillus rhizovicinus: GZH47_03335
Help
Entry
GZH47_03335 CDS
T06983
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prz
Paenibacillus rhizovicinus
Pathway
prz03420
Nucleotide excision repair
prz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GZH47_03335
03430 Mismatch repair
GZH47_03335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prz03400
]
GZH47_03335
Enzymes [BR:
prz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GZH47_03335
DNA repair and recombination proteins [BR:
prz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GZH47_03335
MMR (mismatch excision repair)
Other MMR factors
GZH47_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
SLFN-g3_helicase
AAA_30
PhoH
AAA_16
NACHT
DEAD
Motif
Other DBs
NCBI-ProteinID:
QHW34899
UniProt:
A0A6C0P8V7
LinkDB
All DBs
Position
complement(742457..744736)
Genome browser
AA seq
759 aa
AA seq
DB search
MVDIRKNFWDDVTVNFEDAVEMAESFASLKQQAEVLSERERTHRHAAQQLKTLRKLKSSP
YFGRIDFLEDGESSADEVYLGISSLRDRADEHYLIYDWRAPIASLYYDYPPGPAQLQTPA
GLIRGDLQLKRQFVIRDGEIVSLFDTGVTIGDELLQEVLGRQSDAQMRSIVGTIQREQNR
IIRNERSRLLLVQGAAGSGKTSAALQRVAYLLYRFRGTLNADQIVLFSPNPMFNSYVSTV
LPELGEENMQQTTFQDYLAARLGHSFKLENPYAQLEYALRAEKEPGYEARMAGIRYKATM
GFVRLIDGYLGVLGGAGIIFRDVRFKEEVLATGEEIGAHFYGLDRSIAVPNRMRLTAEWL
LGLLKTRQRAALKEDWVDQAIDLLDKETYLRAYQTLRRQNRKLKDESFDDFDRERELLGQ
YVVMEAVKPVRSRIKKLTFVDVRSTFLRLFLNSEIAAHAAAHAGIELPESWEPICKDTID
RLLLKKMAYEDATPFLYVVERIRGFQTNTSVRHVLIDEAQDYTAFQFAYLQRLFPFSRIT
ALGDLNQSIQAHADAGESTGFTALAALYEASDTETIVLKQSYRSTRPIVEFTSMLIAGGE
EIQPFNRDGLKPKLMVAEDRDALYKMIRAKLTLLATQGNRTIAVICKTAAQSLVVHEALL
GVGPIRLVESETSTFEPGIVVIPSYLAKGVEFDAVLVYDASGSPTGYGQESDRRLFYTVC
TRAMHELYLYALGSAGPFLQGPIEAYYESAEESADLQTN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacattcgaaagaacttctgggacgacgtcacggtcaacttcgaggatgccgtt
gaaatggccgagtcgttcgctagtttgaagcagcaggcggaagtgctatccgaacgggaa
cggacgcatcggcatgccgcgcagcagctcaagacgctgcgaaagctgaagtcttcgccg
tatttcggccgtatcgactttctggaggacggagagtcgtccgcggatgaagtctatctt
ggcatttcatcgctgcgcgaccgcgccgacgagcattacttgatctatgattggcgggcg
ccgatcgccagcctgtattacgactatccacccggtccggcgcagcttcaaacgcccgct
ggcctgattcgcggcgatcttcagctgaagagacaattcgtcattcgcgacggcgaaatc
gtcagtttgttcgataccggcgtgaccatcggcgacgagttgctgcaagaagtgctcggc
cgccagtccgatgcgcagatgcgcagcatcgtcggtacgattcaacgggagcagaaccgc
atcatccgcaacgagcggagccggttgctgctcgtgcaaggcgccgcgggaagcgggaaa
acgtcagcggcgctgcagcgcgtggcttatttgctctaccggttccggggaacgctgaac
gcggatcaaatcgttctgttctcgccgaatcccatgttcaacagttacgtatcgacggtg
ctgcccgagctgggcgaagagaatatgcagcaaacgacgttccaggattatttggccgcg
cggctaggacattccttcaagctggaaaatccgtacgcgcaattggaatacgcgttaaga
gcggagaaggagcctggttatgaagcccgcatggcaggcatccgctataaagcgacgatg
ggcttcgtgcggctgatcgacggctatctcggcgtattgggcggggccggcattattttc
agagacgttcgcttcaaggaagaggtgcttgcgaccggggaggaaatcggagcgcatttc
tacggcctggatcggtccatcgcggtgccgaaccggatgcggttgacggcggaatggctg
ctggggttattaaagaccaggcagcgggcggcgctgaaggaagattgggtcgaccaagcg
atcgatctgctggacaaagagacatatttgcgcgcctatcagacgctgagacggcagaat
cgcaagctgaaggacgaatcgttcgacgatttcgaccgggaacgggagctgctgggccag
tatgtcgtcatggaagcggtaaaaccggtccgcagccggatcaagaaactgaccttcgtc
gatgtgcgctccacgtttctgcgattgttccttaattcggagattgccgctcatgcagct
gcgcatgcaggtatcgagctaccggagtcgtgggaaccgatctgcaaagatacgatcgac
cggctgctgctgaagaaaatggcctacgaggatgctacgccgttcctgtatgtcgtggag
cgtatccgcggtttccagacgaatacatccgttcggcacgtgctgatcgatgaagcgcag
gactatacggctttccagtttgcttacttgcagcggttgtttccattcagccggattacg
gcgctgggcgatctgaaccagtccatacaagcgcatgcggatgccggcgaaagcacgggc
ttcactgctctggcggctttgtacgaggcttcggatacggaaaccatcgtgttgaagcag
agctaccgttccacgcgtccgatcgttgaattcacgagcatgcttattgctggcggcgaa
gaaattcagccattcaatcgggatggcctgaagccgaagctcatggtggcagaggatcgc
gatgccctgtacaagatgattcgcgccaagttgaccttgctcgcgacgcaaggcaatcgc
acgatcgccgtcatctgcaaaaccgccgctcaaagcctggtcgtccatgaagcgctgctt
ggcgtcgggccgatccgtctcgtggagtcggagacgtccacgttcgagccgggcatcgtc
gtcatcccgtcttatttggcgaaaggcgtggaattcgacgcggtgctggtctatgacgct
tcgggatccccgacgggctacgggcaagaaagcgaccggcgattgttttatacggtttgt
acccgggcgatgcatgagctatacttatacgcgctcggcagcgcggggccgttcttgcaa
ggaccgatcgaagcctactacgaatcggcggaagaatcagcggatttgcaaacgaactaa
DBGET
integrated database retrieval system
