Paenibacillus rhizovicinus: GZH47_04605
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Entry
GZH47_04605 CDS
T06983
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
prz
Paenibacillus rhizovicinus
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prz03032
]
GZH47_04605
03036 Chromosome and associated proteins [BR:
prz03036
]
GZH47_04605
03400 DNA repair and recombination proteins [BR:
prz03400
]
GZH47_04605
DNA replication proteins [BR:
prz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GZH47_04605
Chromosome and associated proteins [BR:
prz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GZH47_04605
DNA repair and recombination proteins [BR:
prz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GZH47_04605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
Rpf1_C
CcFV1_CP
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QHW30193
UniProt:
A0A6C0NWV6
LinkDB
All DBs
Position
complement(1008934..1009209)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELIAKVAELTDLSKKDASKAVDAVFDAISDSLQGGDKVQLVGFGNFEVKSREARKG
RNPQTGEEIDIPASKIPSFKAGKSLKDLVSK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacggaactgattgcgaaagtagccgaattgactgacctttccaagaaagat
gcttccaaagcggttgatgccgtttttgacgccatctccgactcgctgcaaggcggcgat
aaagtacaattggtaggcttcggaaacttcgaggtgaaaagccgcgaggcgcgtaaaggc
cgcaacccgcaaacgggcgaggagatcgatatcccggccagcaaaatcccgtctttcaaa
gccggtaaatctcttaaagatttggtttccaaataa
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