Paenibacillus rhizovicinus: GZH47_05375
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Entry
GZH47_05375 CDS
T06983
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prz
Paenibacillus rhizovicinus
Pathway
prz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GZH47_05375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prz03400
]
GZH47_05375
Enzymes [BR:
prz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GZH47_05375
DNA repair and recombination proteins [BR:
prz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GZH47_05375
Prokaryotic type
GZH47_05375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UPA_SH3BP4
Motif
Other DBs
NCBI-ProteinID:
QHW34935
UniProt:
A0A6C0P979
LinkDB
All DBs
Position
complement(1149146..1149865)
Genome browser
AA seq
239 aa
AA seq
DB search
MIVPSFENDWSDILASELEQPYFQELLRSLAEQYEQEAIYPSPSAIFNAFRYTSYSEVKA
VILGQDPYHGPGQAHGLSFSVLPGVKKPPSLLNMFKELHDDLGCSIPDHGCLEPWARQGV
LLLNTVLTVRDGQPASHQGIGWERFTNHVIAELNKRETPVVFVLWGKHAQAKEALIDTGR
HTVIASPHPSPLSARRGFFGSRPYSKINASLRQIGVGEISWRIPPLAELEAAAAANGEE
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgccatcctttgaaaacgattggtcggacatattggcatccgagctggaacag
ccatactttcaagaattactccgttcgcttgcagagcaatatgagcaagaagctatttat
ccatccccgtccgcgatattcaatgccttccgctatacgtcctattcggaggtcaaggcg
gtcattctcggtcaagatccgtatcacggtcccggacaagcgcacggacttagtttctcg
gtgctgccgggcgtgaagaagccgccgtctttgcttaatatgttcaaggaattacatgac
gatctcggctgttcgattccggatcacggttgtttggaaccttgggcaagacaaggcgtg
ctgctattgaacacggtgttgactgtaagggacgggcagcccgcttcgcatcaagggata
ggttgggagcggtttacgaatcacgtgatcgccgagcttaataagcgggagacccctgtt
gttttcgtactgtggggcaagcatgcgcaggcaaaagaagcgctgatcgacacgggacgc
catacggtcatcgcttctccgcatccgagtccgttatcggcgcgtcgcggattcttcggc
agccggccttattccaaaataaatgcaagcttgcggcaaatcggagtcggcgagatttcg
tggcggattccgccgctggcggaactggaagcggcggccgcggctaacggcgaggagtga
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