Paenibacillus rhizovicinus: GZH47_06005
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Entry
GZH47_06005 CDS
T06983
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
prz
Paenibacillus rhizovicinus
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prz03400
]
GZH47_06005
DNA repair and recombination proteins [BR:
prz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GZH47_06005
Archaeal homologous recombinant proteins
GZH47_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QHW30445
UniProt:
A0A6C0NW66
LinkDB
All DBs
Position
complement(1285059..1288574)
Genome browser
AA seq
1171 aa
AA seq
DB search
MKPILLRLSGLQSYREAQEVDFERLCEAGVFGIFGPTGSGKSSILDAVTLALYGKVERAA
NGTQGIMNQAEKTLAVAFTFDLEGGGERKRFRVERQFKRGGDVSVSNTLSRFVEVTEAGD
VVIADKLADVTRCVEAQIGLNMQDFTRAVVLPQGKFAEFLSLTGKDRRSMLQRLFRLERF
GDGLALKLSQRMKAAEAALQEAAAEQLGLGDASAAAVDAAAARHREAAAAAAEARALFAE
ADRLHAERAQVRERLAELREKEALHAKLQAEAPLVAELERELQRLAAAERLLPALRAAGT
AEAALRAAASRREAAALAHAARHAEAEAAAAAWSAAAAEAKAGEPRLLLRLDQLAGAQRL
EGEAAELAAGIALVAQRAGEAADKQRSFGEQAAKAQEMLGRATAKQTELREELKAVELTA
ADRERRSGMTKRLQQFNGLSAQTETARKERDASAVQRDNAGRAQETAESEHRLAYAALTA
QAEQLLPVRSLLDYVSGKLLAASNVIPAWTERVRQGQREQQRMQLAAQLAADLKDGDPCP
VCGSCDHHGRHALPSAADEAADSQLLAWEELSGGFRQLQLTLSPLQAKAESTMERLLETL
QEAGRGHVDASPESDAELRIQQFRLPEAAAAAETLLPAGAEASLEAPDPDGSALPEDALA
HYKQVLSAMQELVSSNGQQLSASEKTAASARTRFADAERRREQSAAAYATQEALAVRAQA
QFDHCEQERGSELAGWAAQFGPELQPHTAEETLQELDRREAAADELRTRLEVSVTYIEDT
ARKQQENGRLAQEAQIEAVELAATLSARQQQLAEKQQQLTAVTDGQPAAGLIRDAEQELG
SLRARNAQLSQSHEAAQQALQQAAELRTGAAETERAADERQRETASDLASALERSPFAHA
EEAAALEPLLAQQAAIADNIARHRESEQQIAAQIRLLIDQLGGRTLTEEEWQNSIAALQR
LKAENELNLQVAAKAERDLESLRGKQERWNELESKRLDMERLAGRLKSLQTVFRGNAFVE
YVAEEQLVQVCRAASERLGFLTKRRYALEVDSGGGFVIRDDAGGGVRRPVSTLSGGETFL
ASLALALALSSQIQLRGKYPLQFFFLDEGFGTLDPELLDTVITALEKLHHETLAVGVISH
VPELRSRLPRRLIVTPSEPFGKGSSVELETM
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattttacttcgattgagcggcttgcagagttaccgcgaagcgcaggaggtt
gatttcgagcggctgtgcgaagcgggcgtcttcggcatcttcggtcctacgggcagcggc
aaatccagcattctggatgccgtgacgctggctctctatgggaaagtcgagcgtgccgcc
aacggtacgcaaggcattatgaatcaggcggagaaaacgctggccgtcgcgttcacgttc
gatttggaaggcggcggggagcggaaacggttccgcgtggaacggcagttcaagcgcggc
ggcgacgtgtccgtcagcaatacgctgagccgcttcgtggaagtgacggaagccggcgac
gtcgtcatcgcggacaagctggcggacgtgacgcgctgcgtggaagcccagatcgggctg
aacatgcaggacttcacgcgcgcggtcgtgctcccgcaagggaagttcgcggaatttctg
tcgctgaccggcaaggaccgccgctcgatgctgcagcggctgttccgtttggaacggttc
ggcgacgggctggcgctgaagctcagccagcgcatgaaagcggcggaagccgcgctgcag
gaggcggcggccgagcagcttggcctcggcgacgcttcggctgccgcggtggatgcggcg
gcggcccgccaccgcgaagcggctgccgcagccgctgaggcacgggctctgttcgcggaa
gcggatcggctgcacgcggagcgtgcgcaggtgcgcgagcggctggcggagctgcgcgag
aaggaagcgctgcacgcgaagctgcaggcggaagcgccgctcgtggcggagctggagcgc
gagctgcagcgcctcgcggcagcagagcggctgctgccggcgctgcgtgccgcaggcacc
gccgaagcggcgctgcgcgctgccgcttcgcgccgcgaggctgccgcgctggcgcatgcc
gcgcggcatgccgaggccgaggccgcggccgccgcgtggtcggcggccgcagccgaggcc
aaggctggcgagccgcggcttctgctgcggctcgaccagctcgcgggcgcgcagcgcctc
gagggcgaagccgccgaattggcggcgggcatcgctctcgttgcgcagcgcgcaggcgaa
gccgcggataagcagcgcagcttcggcgagcaagccgcgaaggcccaggagatgctgggc
cgcgcgacggcgaagcagaccgagctgcgcgaggagctgaaggccgtcgagctgaccgcc
gcggaccgggaacggcgcagcggcatgacgaagcggctgcagcaattcaacgggctgtcc
gcgcaaacggagacggcacgcaaggagcgggacgcctctgcggttcagcgcgacaacgcg
ggacgagcgcaggaaaccgccgagagcgagcatcgattggcctatgcggctttaaccgcg
caagcggaacaattgcttccggtacgaagcctgctcgattacgtgagcggcaagctgcta
gccgcatccaatgtcattccggcgtggacggaacgcgtcagacaaggacagcgggagcag
cagcgcatgcagctggccgctcaattggccgcggatctcaaggacggggatccatgtccc
gtttgcggctcctgcgaccaccatgggcgtcacgctttgccgagcgcggcggatgaagcg
gcggattcgcagcttcttgcttgggaggagctcagcggcggcttccgtcagctgcagctg
acgctttccccgctgcaagcgaaagcggaatcgacgatggaacgtttgctcgaaacgctg
caagaagccgggcgcggccatgtagacgccagcccggagagcgatgcggagctgcgcatt
cagcagttccgactgccggaagcggcggctgcggccgaaaccttgctcccggccggcgcc
gaggcaagcctggaggcaccggatccggatggatcagcactgccggaggacgcgctggcg
cattacaaacaagtgctttccgcgatgcaggaactggtttcgtcgaacggacagcagctc
tccgcaagcgagaagacggccgcatctgcccgaacgcgcttcgcggatgcggaacgccgc
cgggaacaaagcgcggcggcatatgcgacgcaagaagcgttggccgttcgcgctcaggcg
caattcgaccattgcgaacaagaacgcggcagcgagctcgccggctgggcggctcagttc
ggtccagagctgcagccgcatacggcggaggaaacgctgcaggagcttgaccgccgcgaa
gccgctgccgacgagctgcgcacccgtttggaggtcagcgtcacctacatcgaggatacg
gcccgcaagcagcaggagaacggcaggctggcccaagaggcacagatagaagctgtcgag
ctggcagcgacactctctgcgcggcagcagcagctggccgagaaacaacagcagttgact
gccgttacggacggtcagcctgcagccgggctaatccgggatgcagagcaggagcttggc
tctctccgtgcacggaacgcgcagctgtcgcagagccatgaggcggcccaacaggcgctt
cagcaagcggccgagctgcggaccggggcggcggaaacggaacgcgccgccgatgagcgg
cagcgcgaaaccgcaagcgatttggcgtctgcgctggaacgctcgccgttcgcgcacgcg
gaagaggcggctgcgctggagccgctgctggcgcagcaagcggcaatcgcggataacatt
gcgcggcatcgcgagtcagagcagcagattgcggctcagatccgtttgctgatcgaccag
ctcggcggccgaacgttaaccgaggaagagtggcagaactcgatcgcggctctgcagcgc
ttgaaggcggagaacgagctgaaccttcaggtggccgcgaaagcggaacgggacttggaa
tcgctgcgcggcaagcaagagcgctggaatgagctggagagtaagcggctggacatggaa
cgtctggccggcaggctgaaatcgctgcaaaccgtgttccggggcaacgcgttcgtggaa
tacgtggcggaggagcagctcgtccaagtgtgcagagcggcatcggagcggctcggtttc
ctgaccaagcggcgctacgcgctggaggtcgactccggcggcggattcgttatacgcgac
gacgcgggcggcggggttcgccgcccggtatccacgctttccggcggggagaccttcttg
gcctcgctcgcgctggcactggcgctgtcgagccaaatccagctgcggggaaaatacccg
ctgcagttcttcttcctcgacgaaggcttcggtaccctcgatcccgagctgctggacacg
gttattaccgcgctcgagaaactgcatcacgaaacgctggcggtcggcgtcatcagccat
gtgccggagcttcggtcgaggctgccccgcaggctgatcgtcacgccttcggagccgttc
ggcaaaggaagttcggtcgagctcgagacgatgtga
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