Paenibacillus rhizovicinus: GZH47_06630
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Entry
GZH47_06630 CDS
T06983
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
prz
Paenibacillus rhizovicinus
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prz03019
]
GZH47_06630
Messenger RNA biogenesis [BR:
prz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GZH47_06630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QHW30560
UniProt:
A0A6C0NWG6
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All DBs
Position
complement(1422560..1423516)
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AA seq
318 aa
AA seq
DB search
MTRINELRDGEEFVGFYLIKESEVKQTNTTPPKDFMNITLSDASGQVPGKLWDASESDKE
QFKALTLVKVQGIVQLYREKLQVKINRIRKTTEADGVTLTDFVRAAPVEPETLVARIRNV
ADSIADADIRAIVAYCLDKAGDRLFHSPAAKSHHHAYYAGLAYHISRMLELGEFICAQRP
FLNADLVKAGIILHDIAKPEEMVSELGIVSDYSNTGKLIGHISLASLWIAEAAFHAGIAV
DSERVMALQHLVLSHHNLGEWGSPVQPQIAEAVALHYIDSLDAKLQMIEDALDTAASHED
WTPQVRGLENKAFYRLKL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacacggattaacgaactgcgggacggcgaggaattcgtcggcttctatctcatcaag
gagagcgaagtgaagcagaccaatacgacgccgccgaaggatttcatgaacattacgctg
tcggatgccagcgggcaggtgccgggaaaactatgggatgcgtccgagagcgacaaggag
caattcaaggcgctgacgctcgtgaaggtgcagggaatcgtccagctgtaccgcgagaag
ctgcaggtgaaaatcaatcgcattcggaaaacgacggaagcggacggcgtgacgttgacg
gatttcgtgcgcgcggcgcccgtcgaaccggaaacgctcgtcgctcgcattcggaacgtt
gccgacagcatcgccgatgcggacattcgtgcgattgtcgcgtactgcctcgataaagca
ggggatcgcctattccattcgccggcggcgaaatcgcatcatcacgcctattatgcggga
cttgcctatcatatctcgaggatgctggagctgggcgaattcatctgcgcgcagcgtccg
ttcttgaatgcggacttggtcaaagcgggtatcatcctgcatgatatcgcgaagccggag
gaaatggtgtccgagcttggcatcgtatcggattacagcaatacggggaaattgatcggc
catatttcattggcttcgttatggattgcagaagcagcgttccatgcaggaatcgccgtg
gattcggagcgcgttatggcactgcagcatctcgtgctgtcgcatcataatttaggggaa
tggggcagtcccgtccagccgcaaatcgcggaggcggttgcgctgcattatatcgattcc
ctcgatgccaagctgcaaatgatcgaggatgcgctggataccgccgcgagccatgaggat
tggacgccgcaggtaagagggctggagaataaggccttctatcgcttgaagctatag
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