Paenibacillus rhizovicinus: GZH47_06985
Help
Entry
GZH47_06985 CDS
T06983
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
prz
Paenibacillus rhizovicinus
Pathway
prz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GZH47_06985 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prz03019
]
GZH47_06985 (recQ)
03400 DNA repair and recombination proteins [BR:
prz03400
]
GZH47_06985 (recQ)
Enzymes [BR:
prz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GZH47_06985 (recQ)
Messenger RNA biogenesis [BR:
prz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GZH47_06985 (recQ)
DNA repair and recombination proteins [BR:
prz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GZH47_06985 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
zf-CXXC
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
QHW30621
UniProt:
A0A6C0NWV8
LinkDB
All DBs
Position
complement(1497658..1499871)
Genome browser
AA seq
737 aa
AA seq
DB search
MQHEALQTLKRVYGYDSFRKGQSDIISGLLGSKDTLAILPTGGGKSVCYQIPAMLLPGTT
IVVSPLISLMKDQVDALNRLGVPAAYLNSSLDAATYREVVRQTSQGAYKLLYVAPERLDS
GMFESLSAQMHIPLIAIDEAHCVSQWGHDFRPSYRQLAGWIGRLENRPPVAAFTATATPE
VAQDIAAMLGLHDPNIFITGFARTNLTLSVVTGTDKRKFLRDFVQQRPDQSGIVYTATRK
EAEEVCEDLSRLGIAVGKYHGGLNDEERADAQERFRFDENRVMVATNAFGMGIDKPNVRY
VIHWQMPGDVESYYQEAGRAGRDGEESECVLLFEPQDVQVQRFLIDRGTGDPERKTIQLN
KLYTMMHYSRTEKCLLQYIVRYFGEADVPECGKCSNCLDVSAMVEVTEDARKALSCVGRL
KGRFGISMAAKVLKGSREKRILEFGFDRLSTYGLMRQWTERDIADLMYYLVAEGYLRISE
GEYPTVSLTAEALPVLEGSVPVHRRQSAAAKRRETSSSGLSAANTPLFEALREWRRETAA
REKVPPFMLFFDSALREIADRQPVNSEQLLAVKGIGAAKVSKYGHDVIGIVRQFKQDSGS
SDDDGGGERAQTSGSQQGSVARQAPAGAEELANLEGLPSHIQTLTLFAEGKTLAEISALR
GMSRVTIENHLLRCGEEGEELPWENFIPQQYEALIIETIAQVGADKLKPIKEALPEEVDY
FAIKAVIVKHRLSPASE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatgaagcactgcaaacgttaaaacgcgtttatggctacgacagtttccgcaag
gggcaaagcgacattatctccggcctgctaggcagcaaggatacgctggcgattttgccg
acgggcggggggaagtcggtctgttatcaaattccggccatgctgctgcctggcacgacg
attgtcgtatcgccgctcatttctttgatgaaagatcaagtggatgcattgaatcggctc
ggcgtacccgcagcttatttgaacagttcgctggatgcggcgacgtaccgcgaagtcgtg
aggcagacatctcagggcgcgtacaaactgctctatgtcgcgccggaacggctggacagc
ggcatgttcgagtcgttgtccgcacaaatgcatattccgctgatcgccatcgatgaagcg
cattgcgtttcgcaatggggtcatgatttccggccgagctaccgccagcttgccggctgg
atcggccggctggagaaccgtccgccggtggccgcgtttacggcaacggcgacgccggag
gttgcgcaggatatcgcggcgatgctgggcttgcatgacccgaatattttcattacggga
ttcgcgcggacgaatttgacgctgtccgtcgttacggggacggacaaacggaagtttcta
agggatttcgtgcagcagcggcccgaccagtcgggcattgtctacacggcgacgcgcaag
gaagcggaagaggtctgcgaagacttgtcccgtcttggcatcgcggtcggcaaataccac
ggcggtttaaacgacgaggaacgcgcggatgcgcaggaacggttcaggttcgacgagaac
agggtcatggtggcgacgaatgcgttcggcatggggatcgataaaccgaacgtccgttat
gtcattcactggcaaatgccaggcgacgtagaatcgtattaccaagaagccggacgcgcg
ggacgagacggcgaagagagcgaatgcgtgctgctgttcgagccacaggacgtgcaggtc
cagcggtttctgatagaccgcggcacgggagatccggaacgcaagaccattcaactgaac
aagctgtatacgatgatgcattacagccggacggagaaatgcctgctgcagtacatcgtg
cgttatttcggtgaagcggatgtgccggaatgcggcaaatgcagcaactgtctcgatgta
agcgccatggtcgaagtgacggaggacgcccgcaaagcattgtcctgcgtcggccgtttg
aagggaagattcggtatctcgatggcagcgaaagtgttgaaaggctcgcgcgagaagcgc
attctcgagtttggcttcgaccggctgtcgacgtacgggctcatgcggcagtggacggaa
cgcgacattgccgatttgatgtattacctcgtagccgagggatatctgcgcatcagcgag
ggcgagtacccgacggtatcgcttacggcggaagcgctgccggtgctggagggctcggtt
cccgttcatcggcggcagagcgcggcggcgaaacggagagagacgtcaagctccggactg
tccgcggcgaacacgcctttgttcgaggcattgcgggaatggcgccgggagacggctgcg
cgggagaaagtaccgccgttcatgctcttcttcgattccgccttgcgcgaaatcgcggat
cggcagcctgttaattcggagcagctgttggccgtgaaaggcatcggcgccgcgaaagta
agcaagtacgggcatgatgtcatcggtatcgtccggcaatttaagcaagatagcggcagc
tcggatgacgacgggggaggggagcgggctcagacgtccggttctcagcagggatccgtt
gcgaggcaagcaccggcaggtgccgaggagcttgcaaacttggaaggcttgccgagtcat
atccagacgctgacgctgtttgccgaagggaagacgctggccgaaatatccgcgcttcgc
ggcatgagccgagtgaccatcgagaaccatttgctgcgctgcggcgaagagggagaagag
ctgccgtgggaaaatttcatcccgcagcaatacgaagcgttgatcatagagacgatcgcc
caggtaggtgccgataagctgaagccgatcaaggaagcgctgccggaagaggtcgattat
ttcgccatcaaagccgttatcgtcaagcaccgtttgtcgcctgctagcgaataa
DBGET
integrated database retrieval system
