Paenibacillus rhizovicinus: GZH47_07065
Help
Entry
GZH47_07065 CDS
T06983
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
prz
Paenibacillus rhizovicinus
Pathway
prz03030
DNA replication
prz03430
Mismatch repair
prz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GZH47_07065
03430 Mismatch repair
GZH47_07065
03440 Homologous recombination
GZH47_07065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prz03032
]
GZH47_07065
03400 DNA repair and recombination proteins [BR:
prz03400
]
GZH47_07065
Enzymes [BR:
prz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GZH47_07065
DNA replication proteins [BR:
prz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GZH47_07065
DNA repair and recombination proteins [BR:
prz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GZH47_07065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QHW30637
UniProt:
A0A6C0NWQ4
LinkDB
All DBs
Position
complement(1517039..1520842)
Genome browser
AA seq
1267 aa
AA seq
DB search
MSGGREFVHLHVHSEFSLLDGAARIKDLVEAAAEQGMKALALTDHGVMYGAVPFYKACRA
RGIKPIIGCEVYLTTGSRFDKGTRKDNPIYHLILLAKNETGYRNLMKLSSIGHLEGFHYK
PRIDFEALRAHAEGLICLSSCLGSEIAQHLLQDRHDEALRSAERYRSIFGEDFYLELQDH
GMLEQKKVLQATLALAERTGILTVATNDVHYLQPSDAAVQDVLICIGTGTTIEDEDRLQM
LTDQMYLKTPDEMHLQFRQAADAVARTVEIADKCSLELTFGRALLPAFHPIPSGMTSSSY
LEALCRDGLDARYAGGSAWAADPSLQEAAMERLLYELKVIDNMGFSDYFLIVWDFIRFAH
EQGIRTGPGRGSSAGSLVAYTLNITDVDPLKYKLLFERFLNPERISMPDIDIDFNDERRD
EVIAYVSAKYGEEHVAQIITFGTMAAKAAVRDVGRAMAVPFGEVDRAAKLIPNQLGISLE
EALRTSSELREASERQPKTADLLRMALKVEGMPRHASTHAAGVVISGEPLTNYVPLQAGT
ERTALTQYSMENLEAVGLLKMDFLGLRTLSILERTLDWVKQQQGITVDFRFIPDDDPETY
AMLTRGETTGIFQLESSGVRRVLKELKPTQFEDIVSVLALYRPGPMEFIPKYIAGKHGQT
EVVYPHPSLEPILADTYGIIVYQEQIMQIASAMAGFSLGEADLLRRAVSKKKREVLDEQR
AHFVSGSLSQGYGEQDANAVYDMIVRFADYGFPRAHAAAYGVLAFQTAWLKANHPVPFMA
SMLASVTGNQRKTAEYVDECRRMDIEVLAPDVNESSVTFTPVGGAIRFGLASIKNVGTQA
IESLLKERASRKFDSLLDLCRRVDLRVVNKRVLESLIQAGACDALGAHRAQLVAVLDETV
EAALKWRKEREELQIELFGFEEVQNWDVELPEVRPFTTGQLLGLERELLGMYLSGHPLDD
YDEVLDGLPVDRLVDLAEAPDGAYVLVAAMLVSKKPLMTRKGQAMAFLEIEDRIMRVEAV
AFPTVWKRHEQALEPGNLVLALAKLQQQDEDYKLLLEDVLPLGRGIGGDGSAPQDLAAQV
QRLLRFGQSRAARDQAAAAQGRGAGGAAPRDGSPAAAVAGASGGGRPEAGGAAAAPRDAG
GRAGAASGAAGGRQAVPPAAASGGRQRAYAQGAAHSANAPASNGGAAAPAKRNQRLYVKI
VAGREDSAVLEKLKALLTGSAGPLETVLFYEREGRTVVLSEAFRVKPSQRLLQEIEAIFG
KGSAIVK
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggacgcgaatttgtacatttacacgttcatagcgaattcagcttgctcgac
ggggctgcccggatcaaggatctggtagaggctgccgcggagcagggcatgaaggcgctg
gcgctgaccgaccacggggtcatgtacggcgccgttccgttttataaggcctgccgggcc
cgcggaatcaagccgatcatcggctgcgaggtttatttgacgacgggctcgcgcttcgat
aaagggacgcgcaaggataatccgatttaccatctcatcttgcttgccaagaacgagacg
ggctaccgcaacctgatgaagctgagctctatcggacatctggaagggtttcactataag
ccgcggatcgatttcgaagcgctgcgggcgcatgcggaaggtttgatttgcctcagctcc
tgcctgggcagcgaaatcgcgcagcacttgctgcaggaccggcacgacgaggcgctccgt
tcggcggaacgttaccggtcgattttcggtgaagacttctatctggagcttcaggatcac
ggcatgctggagcagaaaaaagtgctgcaggcgacgctggcgctggcggagcggacaggc
atcttgaccgtggcgacgaacgacgtccattatctgcagccgtccgatgcggccgtgcag
gacgtgctgatctgcatcggcaccgggacaacgatcgaagacgaagaccggctgcaaatg
ctgaccgatcagatgtatttgaaaacccccgatgaaatgcatcttcaattccggcaggcg
gcggacgcggtggcgcgtacggtcgagattgccgataaatgctcgctggagctgacgttc
ggcagagcgttgctgcccgcgtttcacccgataccgtctggcatgacctcttcttcttat
ttggaagcgctgtgcagggacgggctggacgcgcgttatgccgggggctccgcatgggca
gcggatccttccttgcaagaagccgcgatggaacgtcttctctatgaactgaaagtcata
gacaacatgggattcagcgactatttcctgatcgtctgggattttatccggttcgcccat
gagcagggcatcaggaccggtccgggacgggggtcttcggcaggcagtctcgtggcgtat
acgctcaacattacggacgtggacccgctcaaatacaaactgctcttcgaacggtttctg
aatcccgagcggatttcaatgccggatatcgatatcgacttcaacgacgaacgccgggac
gaggtcatcgcctacgtatcggccaaatacggcgaggagcacgttgctcagatcattacg
ttcggtacgatggcggctaaggcggccgtccgcgatgtcggcagagcgatggcggtgccg
ttcggggaagtcgaccgcgcggcgaagctgatcccgaatcagctcggcatttcgcttgaa
gaagcgctgcggaccagctccgagctgcgcgaggcgtcggaacgccagccgaaaacagcc
gatctgctgcgcatggcgctgaaggtggaaggcatgccgcggcatgcctcgacgcatgcc
gcgggggtcgtcatttccggcgaaccgctgacgaattacgtaccgctgcaggcgggcacg
gaacggacggcattgacgcagtattccatggaaaatttggaagccgtcggcttgctcaag
atggattttctcgggctgcgcacgttgtcgattctcgagcgcacgctggattgggtgaag
cagcagcagggcattacggtcgatttccggtttatccccgatgacgatccggaaacgtat
gccatgctgacgcgcggcgaaacgacggggattttccagttggagtcatctggcgtcagg
cgggtgctgaaggagctgaagccgacgcaattcgaggatatcgtctccgttctggcgctg
taccgcccgggtccgatggagtttattcccaaatatatcgcgggcaagcacggccagacg
gaggtcgtctatccgcatccttcgcttgagccgattcttgccgacacgtacgggattatc
gtttatcaggagcaaatcatgcagatcgcgtccgcgatggccggattttcgctaggcgaa
gcggatttgctgcgccgcgccgtttcgaagaagaagcgcgaagtgctggacgagcagcgc
gcgcatttcgtcagcggcagcttgtcgcaaggctacggcgagcaggatgcaaatgcggtc
tacgacatgatcgtgcgattcgcggactacgggttcccgcgcgcgcatgcggccgcgtac
ggcgttcttgcgttccagacggcatggctgaaagcgaatcatcccgtaccgttcatggcg
tccatgctcgcatccgtaacgggcaaccagcgcaagacggcggaatacgtggatgaatgc
cgccggatggacatcgaggtgctcgcgcccgacgtgaacgagagcagcgtgacgtttacg
cccgtcggcggggcgatccggttcggcctggcatcgattaagaacgtagggacgcaagcg
atcgagtctctgctcaaagagcgtgcttcgcgcaagttcgatagtctgctggacttgtgc
cgccgcgtcgacctgcgcgtcgtgaacaagcgcgtgctggaatcgctgattcaagccggc
gcttgcgacgcgctcggcgcgcaccgcgcgcagttggtcgccgtgctggacgagacggtc
gaagccgcgctgaagtggcgcaaagagcgcgaggagctgcaaatcgagctgttcggcttc
gaagaggtgcagaactgggacgtggagctgccggaagtccggccgtttacgacagggcag
ctgctgggcctggagcgggagctgctagggatgtacttgtccggccatccgctggacgat
tacgacgaggtgctggacggcttgccggtcgatcgcctcgtcgatttggccgaagccccg
gacggggcatacgtgctcgtcgcggccatgctcgtttcgaagaaaccgctgatgacgcgc
aaagggcaggcgatggccttcctcgagatcgaggaccgcatcatgcgcgtggaggcggtg
gcgttcccgacggtttggaaacgccacgagcaggcgctcgagcccgggaatctcgtgctc
gcgctcgcaaagctgcagcagcaggacgaggattataagctgctgctcgaggacgtgctg
ccgctcggccgcggcatcggcggcgacggcagcgcgccgcaggaccttgccgcgcaggtg
cagcggctgctgcggttcgggcagagccgggccgcgcgggatcaggccgcggccgcgcaa
gggcgcggcgccggcggagctgcgccgcgcgacggcagccctgcggctgccgtcgccggg
gcgtccggcggcggcaggccggaggccggaggcgcggcggcggctccgcgcgacgcggga
ggccgcgccggcgccgcttcgggcgctgccggcggccggcaagccgtgccgccggctgcg
gcgagcggcggccggcagcgcgcctatgcgcagggcgctgcgcacagcgcgaacgcgccg
gctagtaatggcggggcggctgcgccggcgaagcgcaaccagcggctctatgtcaaaatc
gtcgcgggccgcgaggattccgcggtgctggagaagcttaaagcgctgctgacaggcagc
gccgggccgctcgaaaccgtgcttttctacgaaagggaaggccgcacggtcgtcctgagc
gaggccttccgggtcaagccttcccagcggctgctgcaagagatcgaagcgattttcggc
aaaggctcggcgattgtgaaatag
DBGET
integrated database retrieval system
