Paenibacillus rhizovicinus: GZH47_17515
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Entry
GZH47_17515 CDS
T06983
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
prz
Paenibacillus rhizovicinus
Pathway
prz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GZH47_17515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prz03019
]
GZH47_17515
03009 Ribosome biogenesis [BR:
prz03009
]
GZH47_17515
Enzymes [BR:
prz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GZH47_17515
Messenger RNA biogenesis [BR:
prz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GZH47_17515
Ribosome biogenesis [BR:
prz03009
]
Prokaryotic type
rRNA helicases
GZH47_17515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
DUF4391
Motif
Other DBs
NCBI-ProteinID:
QHW32430
UniProt:
A0A6C0P1L3
LinkDB
All DBs
Position
3896935..3898902
Genome browser
AA seq
655 aa
AA seq
DB search
MAGFEQLGIAKERALSLRNEGITEATPIQESAIPVIMQGSDVICQAQTGTGKTLAFLLPM
LEKTRAERDDVQGLILTPTRELALQITTELKNRLASKEEFSVLAVYGGQDVESQLRKLKR
GVHLVVATPGRLLDHIRRGTIKLGAVKMLVLDEADQMLHMGFLTEVEEIMTQMPYRKQTM
LFSATMPAGVRSLAMRYMIEPKEITVRAQQVTVKGIRQLSVEVSAQNKLEQMKRLLEEHN
PYLGVIFCRTKKRASALNDYLQENGFNSDELHGDLSQAKREQVMKRFRDAKLHLLVATDV
AARGLDVEGVTHVFNYDIPENAESYIHRIGRTGRAGEEGLAITLVSPHDRLELAAIEKGI
QMSIPREGRAGGAPAREARSERPRDGRSGGERRGAGRNGAGGAGRGAQGGRSGQAGRGGR
SAAGGRSAGGAYAGAAKRGSGTDEPQQWGAKRADAPRGGRSRYSTPAGEAAGERGTAARG
GEARGRGASAAWSSPGAERGGARSGGEARGRSAGASRGGESRGAASWGGAGRDAERGGAR
SGGEARGRSAGASRGGESRGAASWGGAGRDAERDDARSGGETRGRSAGASRGGAGRSGGA
PQFPGSGDKGQGRPPGRPSSGRSSGGRSSFGGAKGGRPGGGKQGAGGRPQRTRSR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggttttgaacaattagggatcgcgaaggaaagagcgctgtcgctgcggaacgaa
ggaatcacggaagcgacgccgattcaggaaagcgcgataccggttattatgcaaggcagc
gacgtgatctgccaggcgcagacgggaacggggaagacactggccttcttgctgccgatg
ctggagaagacgcgcgcggagcgggatgacgtgcagggcttgattttgacgccgacgcgg
gagcttgcgctgcaaattacgacggagctgaagaaccggctggcgagcaaggaagaattc
agcgtgcttgcggtgtacggcgggcaggacgtggaatcgcagctgcgcaagctgaaacgc
ggcgtgcatctcgtcgtggcgacgccgggccgtctgctggatcatatccgcagaggcacg
atcaagctgggcgcggtcaaaatgctcgtattggacgaagcggaccaaatgctccatatg
ggattcctgaccgaggtcgaggaaattatgacgcaaatgccgtaccgcaagcagacgatg
ctgttctcggcgacaatgccggcaggcgtccgttcgctcgcgatgcgctacatgatcgaa
ccgaaggaaattacggtccgcgcgcagcaagtgacggtcaaaggcattcgccagctgtcc
gtcgaggtcagcgctcagaacaagctggaacaaatgaaacgtttgctggaagagcacaac
ccgtatcttggcgttattttctgccggacgaagaaacgcgcgagcgcgctgaacgattac
ttgcaggagaacggcttcaacagcgacgagctgcatggcgacttgtcgcaggcgaagcgg
gagcaggtcatgaaacgtttccgcgatgcgaagctgcatctgctcgtggcgacggacgtg
gcggcgcgcggtctcgacgtggaaggcgtcacgcatgtcttcaactatgacattcccgag
aatgccgagagctacattcaccgcatcggccggacgggccgcgctggcgaagaagggctg
gcgatcacgcttgtctcgccgcatgaccgtttggagctggctgccatcgagaaaggcatc
cagatgtcgattccgcgcgaaggccgcgcaggcggcgcgcctgcgcgtgaagcgcgcagc
gaacgtccgcgcgatggccgttccggcggcgagcgcagaggcgcaggccgcaatggcgcc
ggcggtgcaggacgcggcgcgcaaggcggacgcagcggccaggctggccgtggcggtcgt
tccgccgcaggcggcagatcggccggcggcgcctatgctggcgcggccaaacgcggctcc
ggtacggatgagccgcagcaatggggcgctaagcgcgcggacgctccgcggggcggacgc
tcgcgctacagcacgccggcgggcgaagcagccggcgaacgcggcacggccgcacgcggc
ggcgaagcccgcggccgcggtgcatcggcagcgtggagcagcccgggcgcggagcgcggc
ggcgcacgcagcggcggcgaagcccgcggccgcagcgccggagcatcgcgcggcggtgaa
agccgcggcgcggcatcgtggggcggcgcaggccgcgacgcggagcgcggcggcgcacgc
agcggcggcgaagcccgcggccgcagcgccggagcatcgcgcggcggtgaaagccgcggc
gcggcatcgtggggcggcgcaggccgcgacgcggagcgcgacgacgctcgcagcggcggc
gaaacccgcggccgcagcgcgggagcatcgcgcggcggcgcaggccgttccggcggcgcg
ccgcagttcccaggcagcggcgataaaggccaaggccgcccgcctggacgtccatcgtcc
ggacggtcgtccggcggccggtcatcgttcggcggcgccaagggcggccgcccgggcggc
ggcaagcaaggcgccggcggcagaccgcagcgcacccgttcgcgttaa
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