Paenibacillus rhizovicinus: GZH47_22995
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Entry
GZH47_22995 CDS
T06983
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
prz
Paenibacillus rhizovicinus
Pathway
prz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GZH47_22995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prz03019
]
GZH47_22995
03009 Ribosome biogenesis [BR:
prz03009
]
GZH47_22995
Enzymes [BR:
prz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GZH47_22995
Messenger RNA biogenesis [BR:
prz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GZH47_22995
Ribosome biogenesis [BR:
prz03009
]
Prokaryotic type
rRNA helicases
GZH47_22995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
SWI2_SNF2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QHW33376
UniProt:
A0A6C0P535
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All DBs
Position
5110545..5112047
Genome browser
AA seq
500 aa
AA seq
DB search
MHVSWETLQLQPQLIEALRMNKIEAPTPVQAETIPLMLAGHDISAKSQTGSGKTLAYMLP
AIQRVDTASSAVQIMVLAPTQELAMQIFRVAETYGEALGVKTQQLIGGASMQRQVEKLRE
HPHIVVGTPGRIHELVKSGKLKLHGIRLVIIDEADQVFNLGSTIEVETLLKGMLRDRQIA
FFSATRPQAMADVEERWMREPKQVNVSPDQQTPSKVAHYYVVCDKRDKADTARRLIHLLK
PASALLFINETDEIANYEAKLKYEGFSVETLYGDADKQRRSSTLARFREGRLQILLATDV
AARGLDIADLALVVHLDPALDADHYVHRSGRTGRMGKSGTVVSIVTRNQLFIMDKFRKQL
GIDLQEKTMYKGKLWSPGEEQGVRGEDRPRREFSSTRSSGDAARRPGQGASAAGGLSAAR
KPPAPAQSGEAAAEPAARRATIAGGQSTPASRSGQAAAPRKQDPKQSKPAKSKKELERER
KNKGAPKWLKAKRDGEQGEK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgtcttgggaaacgttacagctgcagccgcagctgatcgaagcgttacgaatg
aataaaatcgaagcgccgacgccggtgcaggcggagaccattccgctgatgctggcgggg
catgatatttccgcgaaatcgcagacgggctcgggcaagacgctggcctacatgctgcct
gctatccagcgggtcgacacggcgagcagtgccgtgcaaatcatggtgcttgcgcctacg
caggagctggcgatgcaaattttccgcgtggcggagacgtacggcgaagcgctcggcgtg
aagacgcagcagctcatcggcggagcatccatgcagcgccaagtggagaagctgcgggag
catccgcacatcgtcgtcggtacgccggggcgtattcacgaactggtgaagtccggcaaa
ttgaagctgcacggcattcggcttgtcattatcgacgaagcggatcaagtgttcaatctc
gggtcgacgatcgaagtggaaacactgctgaagggcatgctgcgcgaccggcagatcgcc
ttcttctcggcgacgcggccgcaggcgatggccgatgtcgaggagcgctggatgcgggag
ccgaagcaggtgaacgtgagtcctgaccagcaaacgccgagcaaagtcgcccactattac
gttgtctgcgacaagcgcgataaggcggatacagcaaggcgcttgattcatctgctgaaa
ccggcgtcagcgctgctattcattaacgaaacggacgaaatcgcgaattatgaagcgaag
ctgaaatacgaaggcttctccgtggagacgctgtacggcgatgccgacaaacaacggcgc
tcgtcgacgctggcccggttcagggaaggccggctgcagatcctgcttgcaacggacgtt
gcggcccgaggactcgatatcgcggatttggcgctcgtcgtccatttggatccggcgctg
gatgccgatcattacgttcaccgctccggacggacgggacggatggggaaatccggtacg
gtcgtgtccatcgtgacgcggaaccagctgttcatcatggacaagttccgcaagcagctc
ggcatcgatttgcaggagaaaacgatgtacaagggcaaactgtggtcgccgggcgaggaa
caaggcgttcgcggcgaggatagacctcggcgggaattcagctcgacccggagcagcggc
gacgcagcgcgcagaccgggccaaggtgcctccgcggctggcggtttgtccgcagcccgt
aaaccgccggcaccggctcaatccggcgaagcggctgcggagccggccgcgcgccgggca
actatcgccggcgggcaatcgacgccggcttctcgttccggacaagccgctgcgcctcgc
aagcaggatccgaagcagtcgaagcccgctaaatccaagaaagagctggagcgggaacgg
aagaacaaaggcgcgccgaaatggctcaaagcgaagcgcgacggcgaacagggcgaaaag
taa
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