Paenibacillus rhizovicinus: GZH47_24885
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Entry
GZH47_24885 CDS
T06983
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
prz
Paenibacillus rhizovicinus
Pathway
prz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GZH47_24885 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prz03400
]
GZH47_24885 (uvrA)
DNA repair and recombination proteins [BR:
prz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GZH47_24885 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GZH47_24885 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
AAA_15
AAA_16
DnaJ_CXXCXGXG
AAA_25
Viral_helicase1
cobW
Anti-TRAP
DUF7573
Motif
Other DBs
NCBI-ProteinID:
QHW33712
UniProt:
A0A6C0PAX1
LinkDB
All DBs
Position
5576367..5579285
Genome browser
AA seq
972 aa
AA seq
DB search
MSMRQTISIRGARENNLNNVSLDIPREKLTVVTGVSGSGKSSLAFDVIYGEGQRRFMESI
SSSYAKRYIPQLKKPDVDFVYGLSPVVSIEQKTGTPNPRSTVGTMSDVYDYVRLLFATLG
TPHCPRCSAELEAKSPNQIAEHILALPAGSTVELYAPVQPIFGETFSVLFDEIRTKGYRM
FKIDGVLHDTGDRIELDEHAPHELEVLIDKYEVKRDIYKQLVLSIELGMKIGEGFLHIVP
SGSKLTERDIERFQHQFACKAHHYVAGEMSPGYFTFNDTDSACRTCLGIGAYKYAQPELM
IASRERSLRRGALNERLYNLKNPRAWRNMVIYSLSQHYGFSLDTPFKDLPPEIVDMLFYG
TKGERYTFLGSEDNHQGHWIQEHVGKQWTYDGIVGEIDRWYRNSRKKQELKGYEESMFNL
VMVEQTCPECHGMRFKPERLLVTLAGKTIHGLVSMPLDEMKSFLQSFELPRRKLQVGKQI
MNELLGRIDLLLDIGLGYLNLDRRSDTLSGGESQRIRLSTQIGSGLMGMLYVLDEPSIGL
HPRDSQKMIDTLKKLRDSGNTVIVVEHDVETMMAADHVIEIGPGPGQHGGNVVAEGTIAQ
IMANPDSLTGQFMSGVRNIVAPAERRQLGDKVLRIVGARENTLKNVTVEIPLGVMTCVTG
VSGSGKSSLINDVLYKALHKHFQDARIIPGLHDRIEGVEHINGVINIDQSPIGRMPTSSP
ATYVGLYDRIRKLYASQELSVERGYTETYFSFNAKGGRCEECKGHGTITSQLLFMADVES
VCPACKGARFASELLDVTYNGKTIADVLEMSIEEAEQFFRGEKYVAHKLKVLNELGVGYL
RLGHSATVLSGGEAQRIKLAAELGKMKRGAHYLYIFDEPTTGLHLADIQKLLDCMNRLLE
AGHTVLVIEHHLDVIKTADHVIDMGPEAGRNGGYVVATGVPEDIAQVEASHTGRCLREIE
ASYSVRKAGASV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaggcaaacgatctcgattcggggcgcgcgcgaaaataacttgaacaacgtc
tccctcgatattccgcgggagaagctgaccgtcgttaccggcgtcagcggttccgggaaa
tcgtcgctcgcgttcgacgtcatctatggcgagggtcagcggaggtttatggagtcgatc
tcctcttcctatgccaagcggtacattccgcagctgaagaaaccggatgtcgatttcgtc
tacggcctgtcgccggtcgtctccatcgagcagaagacgggaacgccgaatccgcgttcg
acggtcggcacgatgtccgacgtgtacgattatgtgcgcctgctgttcgcgacgctcgga
acgccgcattgtccgcgctgcagcgccgagctcgaggcgaagtcgccgaatcagatcgcg
gagcatatcctggcgctgcccgcgggatcgacggtcgaactgtacgcgcccgtacagccc
atattcggcgagacgttcagcgtgctgttcgacgagatccggacgaaaggctaccgcatg
ttcaagatcgacggcgtcctgcacgacacgggcgaccggatcgaattggacgagcatgcg
ccccatgagctggaagtgctgatcgacaagtacgaagtgaagcgcgacatctataagcag
ctcgtgttgtcgatcgagctgggcatgaagatcggcgaaggcttccttcatatcgtgccg
agcggcagcaagctgacggagcgggacatcgagcgtttccagcatcagtttgcgtgcaag
gcgcatcattacgtcgcgggcgagatgtcgccgggctattttaccttcaacgacaccgac
agcgcttgccgcacttgtctgggcatcggcgcttacaagtacgcgcagccggagctgatg
atcgccagccgcgagcgaagccttcgccgcggagccttgaacgagcggctctacaacttg
aagaacccgagggcatggcggaacatggtcatctacagcctctcgcagcattacggcttc
agtctcgacacgccgttcaaggatcttccgcccgaaatcgtggacatgctgttctacggc
acgaagggggagcgatatacttttctcggttcggaggacaatcaccagggtcactggatt
caggaacatgtcggcaagcagtggacgtacgatgggatcgtaggcgaaatcgaccggtgg
taccggaactcgcgcaagaagcaggagctgaaaggctacgaggagtcgatgttcaatctc
gtcatggtcgaacagacctgtcccgagtgccacggcatgcggttcaagccggagcgcctg
ctcgttacgctggcgggcaagacgatccatggccttgtctccatgccgctggacgagatg
aagagcttcctgcaatcgttcgagcttccgcggcggaagctgcaggtcggcaagcagatc
atgaatgagctgctcgggcggattgatctgctgctcgatatcggactggggtatttgaac
ctggaccgccgttcggacacgctctccggcggagagtcgcagcggatccgtttatcgacg
cagatcggttcaggcctgatggggatgctctatgtgctggacgagccgagtatcggactg
catccgcgggacagtcagaagatgatcgacacgctcaagaagcttcgcgattccggcaat
acggttatcgtcgtggagcatgacgtcgagacgatgatggcagcggatcatgtcattgag
atcggccctggcccaggccagcacggcggcaatgtcgtggcggagggaacgatcgcgcaa
atcatggcgaatcccgattcgctgacgggtcagttcatgagcggcgtccggaacatcgtt
gcgcccgccgaacgcagacagcttggcgacaaggtgctgcgaatcgtcggcgcgcgcgag
aatacgctgaagaatgtcaccgtcgagatcccgcttggcgtgatgacatgcgtgacgggc
gtgtcgggttccggcaagagcagcttgattaacgatgtgctgtataaagcgctgcacaag
cattttcaggatgcgcgcatcattccgggactgcatgatcggatcgaaggcgtagaacat
atcaacggcgtcatcaacatcgaccagtcgccgatcggccgaatgccgacctcgagccct
gcgacgtatgtcgggctgtacgaccgcattcgcaagctgtatgcttcgcaggagctgtcc
gttgaacgaggttataccgagacgtatttcagcttcaacgcgaagggcggacgctgcgag
gaatgcaagggacacggaacgattacgtcgcagctgctgttcatggccgacgtggaatcg
gtgtgcccggcgtgcaaaggcgcgcgcttcgccagcgagctgctcgatgttacctacaac
ggcaagacgattgccgatgtgctggagatgtcgatcgaggaagcggagcagttcttccga
ggcgagaagtacgtcgcgcataaactgaaggtgcttaacgagcttggcgtcgggtacctg
cgtctcggccattcggcgacggtgttgtccggcggcgaggcgcagcgcatcaagcttgcg
gcggagcttggcaagatgaagcgcggcgcgcactacctgtacatcttcgacgagccgacg
accggcttgcatctcgcggacatacagaagctgctcgactgcatgaaccgactgctggaa
gcgggtcatacggtgcttgtcatcgaacaccatctggacgtcatcaagacggccgaccat
gtcatcgacatgggaccggaagccggccggaacggcggctatgtcgtcgcgacgggcgtg
ccggaagatatcgcgcaagtcgaagcgtcgcatacgggccgctgtttgcgggagatcgag
gcgtcctattcggtgcggaaggccggggcgtcagtctag
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integrated database retrieval system
