Paenibacillus rhizovicinus: GZH47_26815
Help
Entry
GZH47_26815 CDS
T06983
Name
(GenBank) collagen-like repeat preface domain-containing protein
Organism
prz
Paenibacillus rhizovicinus
Brite
Glycosaminoglycan binding proteins [BR:
prz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
GZH47_26815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
BclA_C
CBM_5_12
Motif
Other DBs
NCBI-ProteinID:
QHW34046
UniProt:
A0A6C0P6S5
LinkDB
All DBs
Position
complement(6025307..6029053)
Genome browser
AA seq
1248 aa
AA seq
DB search
MAEFDGNGNPLDPDNRPRLHALGGSLNPLDASIPLTQAQLNKLKQLLGQMAGLLSSVLAA
PTPSGIAQLNALLHELRTLVLDIDFERLEQSALLALLENHITLVEASPFSPLGASVISID
LLNMLGGFILLFAIAPSDKDALVSLIRANDQQLAAIFALLDRNPGQAGPPGTPGAPGPQG
PPGGPGAPGAAGPPGAAGPAGAAGAAGPAGAAGAAGAAGAQGPTGATGAGFGDVEPFNPI
DVPNYSAGQVVTFNGSTFIALVAGPTGTPGSSPDYMLIAAAGVTGATGSTGATGAGATGA
TGTPGLLGATGATGGTGATGAGATGATGVTGATGTPGLLGATGAGLEGITAYNPVNAPAY
QAGQVVTSGGSTYIALVASPSGTPGTSPDYLLLASAGATGTTGATGATGAGATGSTGATG
STGLIGPAGLTGATGATGSGATGSTGATGTAGSTGATGAPGTTGATGATGATGATGGAGP
TGAGLEGVTAFNPANAPTYPAGQIVTFDGSTYIALVAGPTGTPGASPDYLLLASAGATGV
TGDTGATGAGVAGATGPTGTAGSTGATGAPGTTGATGATGATGEIGAIGTTGFTGASGST
GATGETGATGATGAGVTGATGSTGAVGSTGATGTTGVTGATGAGVTGATGDPGATGSTGA
TGLTGATGETGAVGATGAAGPTGAGLEGVTAFNPANAPTYPAGQIVTFDGNTYIALVAGP
TGTPGTSADYLLLAAAGATGSTGATGATGAGATGSTGATGSNGTTGATGETGSTGATGAT
GVTGSSGTTGSTGETGATGATGATGDTGATGTTGAVGPTGAGLEGITAFNPANAPTYPAG
QVVTSDGSTYISLVAAPTGTPGTSPDYLLLAAAGETGASGATGATGSAGATGETGASGAT
GATGSAGATGETGAAGATGATGSAGATGETGAAGATGATGSAGATGETGAAGATGATGSA
GATGETGAAGATGATGSAGATGETGAAGATGATGSAGATGETGAAGATGATGSAGATGET
GAAGATGATGSAGATGETGAAGVTGATGSAGATGETGAAGATGIAGSTGATGTAGATGAT
GETGTNGATGANGATGTTGATGETGATGATGTVFTDINSFAANTAGSVIAVILGGTNVAL
PNNQVLNGGITVNGANDTFTVPSAGSYMVSYQANLTAALLLSTRLVINGTPSTPTTITPV
LSISEFNNMAILNLTAGSTITLQFFGLLGAATLLAGSAGAALTIIKLS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttcgatggtaacgggaatccgcttgacccggataacaggccgcggcttcat
gctctaggcggcagccttaatccgctagacgcttcgatcccgttgacgcaggcacagctt
aacaaactgaagcagctgcttggccaaatggcagggctgctgtcttccgtcctcgccgct
ccgacgccaagcgggatcgcccagctgaacgccctgcttcacgagctgcggacgctcgta
ctggacattgatttcgaacggctggagcagtctgcattgcttgcgctgcttgaaaatcac
attacgctcgtggaggcctcgccattctcgccgcttggcgcttcggtaatcagcatcgat
ctgctcaacatgcttggcgggttcattctgttgttcgccatcgccccttccgacaaagac
gcgctggtctcgctcattcgggccaacgatcagcagcttgcggcgatcttcgcgctgctt
gacagaaatcccgggcaagcaggacctcccggtacgcctggggcgccgggaccgcagggt
cctccgggaggtccgggagcacctggggctgccgggccgccaggcgctgccgggcctgcg
ggggccgctggcgctgcgggacctgctggcgcggcaggtgccgcgggtgcggcaggcgcg
caaggaccgactggggcgaccggggcgggatttggtgacgtcgagcctttcaatccgatc
gatgtgccgaattactctgccgggcaggtcgttaccttcaatggcagcacgtttattgcg
ttagtggcaggtccaaccggtacgccggggtcttcgccggattatatgttgatcgccgcc
gctggcgtgacgggcgctactggcagcaccggggctactggagctggagcgactggggct
acgggaacgccaggattactcggagcgaccggcgcgactggcggcaccggggcaactggc
gccggggcgaccggcgcgaccggtgtcacgggtgctacgggaacgcccggactactcggt
gcgaccggcgccggccttgaaggcatcacggcatacaatcccgtcaatgcgccggcttac
caagcagggcaagtcgtcacctccggcggcagcacgtatattgcgttagtggcaagtccg
agcggcacgccgggtacttcgccggactatctgctgcttgcttccgcaggagcgaccggt
acgactggggcgacaggggcgactggagcaggcgcgaccggttccactggcgcaacgggt
tcaaccgggttgatcggccctgctggtttaaccggggcgactggcgccacgggaagcggc
gcgaccggttccactggcgcgacgggtactgcgggatcgaccggtgctaccggcgcaccg
ggtacgactggcgctactggcgcgacgggagcgactggtgcaacgggcggcgcaggtccg
accggcgccggattagaaggcgtcacggcattcaatcccgccaatgcaccgacctaccct
gccgggcagatcgtcacattcgatggcagcacgtatatcgccttggtggcgggtccaacg
ggcacgccgggcgcttcgccggattatctgctgcttgcttccgcaggcgcgacgggcgtt
acgggggatactggcgctaccggagctggcgtggccggcgcaactggtccgacgggtact
gcgggatcgaccggtgctaccggcgcaccgggtacgactggcgctactggcgcgacaggt
gcaacgggggaaatcggcgcgataggcaccacgggatttaccggggcgtctggctctact
ggcgcgacgggcgaaactggagcgacgggcgcaacgggagcaggcgttacgggggctacc
ggatctaccggggctgtgggttcgactggagcgacgggcacgaccggggtgaccggcgcg
acaggagctggcgttaccggagccactggcgatccgggagccacgggatctaccggagct
acgggcttgactggcgcgactggcgaaaccggagccgtaggggcaaccggggccgctggt
ccgactggcgccgggcttgaaggcgtcacggcatttaatcctgccaatgcacctacctac
cctgccgggcagatcgtcacattcgatggcaacacctatattgcgttggtggctggtccg
acgggtacgccaggaacttcggcagactatctgctccttgccgcagcaggtgcgaccggc
tctacaggggcaactggcgctaccggggcaggcgcgactggatccacaggtgccacgggc
tccaacggcacaaccggggctacgggtgaaacaggctcaaccggggcaaccggggctacg
ggtgttacaggctcttccggcacaacgggttcgacaggtgagactggtgcgaccggcgcg
actggcgcgactggcgatacgggtgctactggaacaaccggagccgtaggtccgactggg
gccggcctggaaggcatcacggcattcaatcccgccaatgcaccgacttaccctgccggg
caggtcgtgacctccgatggcagtacgtatatttcattggtggctgctccgacgggcacg
ccaggaacatcgccggattatttgctgctcgctgcagccggcgagactggcgcctctggg
gctaccggagcaacaggctcagctggggctaccggcgagactggcgcctctggggctacc
ggagcaacaggctcagctggggcgaccggcgagactggtgccgctggggctaccggagca
acaggctcagctggggcaaccggcgagactggtgccgctggggctaccggagcaacaggc
tcagctggggcgaccggcgagactggcgccgctggggctaccggagcaacaggctcagct
ggggcaaccggcgagactggcgccgctggggctaccggagcaacaggctcagctggtgcg
accggcgagactggcgccgctggggctaccggagcaacaggctcagctggggcaaccggc
gagactggcgccgctggggcgaccggagcaacaggctcagctggtgcgaccggcgagact
ggcgccgctggggctaccggagcaacaggctcagctggtgcgaccggcgagactggtgcc
gctggggttaccggagcaacaggctcagctggggcaaccggcgagactggcgccgctggg
gctaccggaatcgctggctccaccggggcgacgggtactgccggtgccactggcgcgact
ggggaaaccggcaccaacggagcaaccggagccaacggtgcgactggcacaaccggcgca
acgggcgagaccggagccactggcgcgaccggaaccgtgttcacggacatcaacagcttc
gcggccaacactgccggttccgttatcgctgttattcttggcggaactaacgtcgccttg
ccgaacaaccaggtgctgaacggcggaattaccgtcaatggcgccaatgatacgtttacc
gtcccgtccgccggcagttatatggtttcctaccaagccaacctaacggcggctctgctt
ctcagcactcgactggtcattaacggcacgccatcgacgcctactacgatcacgccggtc
ctatccatttccgaattcaataatatggcgatcttgaacctcactgcgggctcgacgatt
acgctgcagttcttcggccttctgggagccgcaacgcttctcgccggatctgccggcgct
gcgctgaccatcatcaagctttcctaa
DBGET
integrated database retrieval system
