Paenibacillus rhizovicinus: GZH47_28105
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Entry
GZH47_28105 CDS
T06983
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
prz
Paenibacillus rhizovicinus
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prz02000
]
GZH47_28105
Transporters [BR:
prz02000
]
Other transporters
Pores ion channels [TC:
1
]
GZH47_28105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7601
DUF5979
SpaA
Collagen_bind
DUF6385
Motif
Other DBs
NCBI-ProteinID:
QHW34279
UniProt:
A0A6C0P6Y8
LinkDB
All DBs
Position
6292828..6297882
Genome browser
AA seq
1684 aa
AA seq
DB search
MKLKTVFMWLLTIALVIGAVPPSGGLDAWAAGNADKSGALTGLTAIVKQGNAVIPEGGTI
DLANGDELSVEVSFGVPVAGDDPTPPTVVEQNDTASFTLSEGFTLTSGTTLPLQFNGKLV
GTTTLNTTGTNTVTAETLFDGDADLFDETGGYYGVQGKINVGLKYDSSGAAGDEGTHQVQ
ILGKTYTIVVPPQPIVYNVVKSGTADLTSKVIHWTVQLTGTKGATAVDLNGYVFSDDLSG
VGAYVANTFQVDGVSATPVETGSLLTYTLDAAASVRTVTFDTAIPDDMYYRNHEAKSVSN
TVNLLKDNAPVKDGTGTVTYTTPTWIEKTGAPKHANPGSDPAYDPDDQYITWTITANKSQ
ASLDELTLTDALQTGLDFVSAQWQTSTDGTIWTNDGASITVAPADGNYTRSGTTNTMVRL
VITSKVHDNGTDITVFKKTFNNAATLDWAGKPSGATMSTGNVGVGIGYDALTKTGVLDKP
NRVITWTVKADAKNQPIADMSTYDLIVYDGSTNLSGTTGWPAGISEANLTKRTGLRYVAG
SGTTSAGALNVIPIMKNGQQVADLIEVTGLSTTAVNTMTFKTLIVDPEVYAGNSDKNVNN
TASLFTGTNRLRDATGTVTYQSRTLAKELLKREAMAAPAAGVNAQRTTNANEGFDYDDKS
VIFRLSVNADGLNFNTANVASNEGNDTLGTASVNDTLPAGWEFEDIVPGQKYLIFEGTAG
SGSSVNAASTTPTPEASVTGLTSNFGTAGQAVFTFAQLDKPYVILVKAKPTDAALAGYFE
SNETSTITNNLNLQAANWTPGTSKSQQVSIHSEILNKSHSLPANGTLIWTIVYNPNQIGT
SGQTIVDTLPLGLDLRTDSTGALLLDDGHGVNYLTATELTLEPDGSLVDGAAVTLSPGGN
LIYDNATRELTFNIPDYNKAYRLTYLTDITGEVGTIVNYAILSQGDANTSKQEIQYAISN
ADSSATLLRGGWLEVAKTNGTTAAPLAGAEFTLYAEDGSTIIRKAVSSADGKLRMKAIPA
GTYVLRETAAPAGGYALEGIDHTVSVDTSGPTVVTSIDGKTGADANKLAVANYLTNTTGK
LVISKTVAGNDGDLAKKFNFTVTFTDAPGVYDYTGTGGAASGTIASGGTISLAHGQSIII
AGLPADAQYTVTETDYANDGYKTTSLGATGEIAVDETQTAAFLNTKDKPGNLIISKTVTG
NDGDQSQTFDFTITLNTAGVYNYTGTGGAGNGTITSGDKISLAGGQSITIAGLPAGTTYT
VAEDDYAATGYATTKTGDTGTIVTDDFQSAQFVNARDDWFGSLKIGKSVKGNAGDKARTF
DFTVNLSAAGVFNYTGAGGAANGTIASGDTFPLADGQSITIAGLPRGTTYKVVEASYAAD
GYATTKTGESGAIVGAQEQTATFVNTKNVWYSADEGHLTISKTVSGPDADLTKKFSFTVD
LNGAPGTYAYSGSGGSGTIRSGGTVALAHGEAITIAGLPLGTSYTVVEADYSAEGYTTTD
TGASGVFNSTGTQSAAFVNVYEAKKPEQPTPGGEDGGSKDNTGGEDGGKDNGSKDNMSGE
DGGKDNGNQDDKGGEDGGKDNGSKDNTGGKSDGGGQQPGSGNGGSSGGAGDKSTDGSTGG
RTIATGSGGKTDHKVQTGKDGTPKTGDRNDRQIGQFGLIFFGAALAALIVANVISRRRIG
RKRY
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaaaacagtttttatgtggctgctgacgatagccctcgtaatcggggcggtg
ccgccgtccggggggctggacgcgtgggcggcgggcaacgcggacaagtctggcgcgctg
acagggcttactgcgatcgtgaagcaggggaacgcagttattccggaaggcggtacgatc
gatctagcgaacggggatgaactcagcgtcgaagtatcgttcggcgttcctgttgcgggg
gatgatccgactccgccgacggtcgtggagcaaaatgatacggccagctttacgctcagc
gaaggtttcacgcttacgtcgggaacaacgctgcctcttcaattcaacgggaagcttgtt
ggaacaacgacgctaaatacgaccggaaccaatacggtgacggccgaaacgctgttcgat
ggagatgcggatttgtttgatgaaacgggcggttattatggggtccaagggaaaatcaac
gtagggttgaaatacgacagctccggcgccgccggggatgaaggcactcaccaagtacag
attctcggcaaaacctatacaatcgtagtgccgcctcaaccgatcgtgtacaacgtggta
aagtcggggactgcggatttgaccagcaaagtcatccattggacggtgcagctgaccggg
acgaagggggcaaccgcggttgatctgaacggatatgtgttcagcgacgatctgagcggc
gtaggcgcatatgtggctaacacgttccaggtcgacggcgtatctgctacccctgtcgag
acgggcagcttgttgacgtatacgctggatgccgcggctagcgtgcgcaccgtcacgttc
gataccgcgatcccggacgatatgtattatcggaatcacgaagcgaagtcagtcagcaat
accgtcaatttactgaaggacaatgcgccggtgaaggacggtacgggcacggtcacgtac
acgacgccgacgtggatcgagaaaacgggagcgcccaagcacgccaatccgggtagcgat
cctgcttatgacccggacgatcagtacatcacgtggacaattacggctaacaagtcgcaa
gcttctttggacgaactaacccttacagacgcgctgcagacaggtttggacttcgtctcg
gcgcaatggcaaacttccacggacggtacgatctggacgaacgacggcgccagcattacc
gtcgcgccggcagacggcaattatacccgctcgggaacgaccaacacgatggttcggctc
gtgattacgagcaaagtgcatgacaacggcaccgacatcactgtattcaagaagaccttc
aataacgctgcgacgctagactgggccggcaagccgagcggcgcgacgatgagcactgga
aacgtcggcgtcggtatcgggtacgacgcgctgacgaagacgggcgtgctggataaacct
aatcgcgtgattacgtggacggttaaggccgatgccaagaatcagcctatcgccgatatg
agtacgtatgatttgatcgtctacgacggcagcacgaatttgtccggcacgacgggctgg
ccggcaggcatctccgaggcgaacttgacgaagcggacgggtctgcggtatgtagcggga
agcggcacgacttccgctggggcattaaacgtgattccgattatgaagaacgggcagcag
gtcgccgatctgatcgaagtgacgggattgtcgacgaccgcggtcaatacgatgacgttc
aagacgctgatcgtagaccctgaagtatatgcaggaaatagcgataagaacgtgaacaat
accgcctcgctttttactgggacgaaccggctgagggacgccacaggaactgtcacctac
cagagccgcacgctggcgaaggaactgctgaagcgcgaggcgatggccgctccggctgct
ggggttaacgcgcaacgtacgaccaacgcgaatgaaggcttcgactatgatgacaagtcc
gttatcttccgtttgagcgtgaatgcggacggcctgaattttaacacggcgaacgtggcg
agcaacgagggaaatgacacgcttggcacagcttcggtgaacgatacgctgccggcaggc
tgggagttcgaggatatcgttccaggtcagaagtatttgatcttcgaaggaacggcaggc
tccggctcttccgtgaatgcggccagcacgacgccgacgccggaagcgagcgtaaccgga
ttgacgtcgaacttcggcaccgcagggcaggcggtcttcacgttcgcccagctggacaag
ccatacgtcatactcgtgaaggctaagcccacggacgctgcgcttgccgggtatttcgag
agcaacgaaacttcgacaataaccaacaatttgaacctgcaagcagcgaattggaccccg
gggacttccaagtcgcagcaggtgtccattcatagcgagattctgaacaagtcccattct
ctgcctgcgaacggaacgctgatctggaccatcgtatacaacccgaatcagatagggaca
agcggccaaacgatcgtcgatacgttgccgctcggcttggacttgcggacggactcaaca
ggcgcgctgctgttggacgacggtcacggcgtcaactacttgaccgctacggaactgacg
ctcgagccggacggatcgctggtagacggggccgccgtcacgctttcgccgggcggcaat
ctgatctacgataacgcaacgcgtgaattgaccttcaatattccggactacaacaaggca
taccgactgacctacttgacggacattaccggcgaagtcggcacgatcgttaactatgcg
atactttctcaaggtgacgccaatacgtccaaacaagagatccagtatgcgatcagcaac
gcggacagctcggcgacgctgttgcgaggcggctggctggaagtggcgaagacgaacgga
actacggcggcgccgctggccggcgcggagttcaccctttatgcggaggacggcagcacg
atcattcgtaaggctgtcagctccgccgacggcaaacttaggatgaaagctattccggcc
gggacgtatgtgctccgcgagacggccgctccagccggcggctatgcgctggaaggcatc
gatcatacggtcagcgtagatacctccggcccgactgtcgtgacttccatcgacggtaaa
acgggagcggacgccaataagctggctgtagcgaattatttgacgaatacgacgggcaag
ctcgtcatttcgaagaccgttgccggcaatgacggcgatctcgccaagaagtttaatttc
acggtaaccttcaccgatgcgccgggcgtatacgactacaccggcactggcggcgcggcg
agcggcacgatcgcgagcggcggcacgatctcgcttgctcacgggcagagcatcatcatc
gctggtttgcccgcggacgcgcagtatacggtgacggaaacggactatgccaatgacgga
tacaagacgacaagtcttggcgcaacgggcgaaatcgcggtcgatgagacgcaaaccgcg
gctttcttgaacaccaaggacaagcccggcaatttgatcatcagcaagacggtaacgggc
aatgacggcgatcagtcacaaacattcgattttaccatcaccttaaacacggctggggta
tacaactacaccggtacaggcggcgcggggaacggcacgattacaagcggcgataagata
tccctcgcgggcggacagagcattacgatagcaggtctgcctgctggcaccacgtatacc
gtagcagaagatgactatgctgctaccggttatgcaacgaccaagacgggcgacacgggg
acgatcgtgacggacgacttccaatccgcccagttcgtaaacgctagagacgactggttc
ggcagcctgaagattggaaagtctgtaaagggcaacgcgggcgataaagcaaggacgttc
gatttcacggtgaacttgagcgcagctggcgtattcaattacaccggcgcaggcggcgcg
gcgaatggcacgattgcgagcggcgatacgttccctctcgctgatggtcagagcattacg
atagcaggtctgcctagaggcacaacgtataaggtcgtggaagccagctacgctgcggac
ggatacgccacgactaagacgggcgaaagcggagcaatcgtaggcgcgcaggagcaaacc
gccaccttcgtcaacacgaagaacgtgtggtactcggcagacgagggccatctgacgatc
agcaagacggtgtccggaccggacgccgatctgacgaagaaattcagcttcacggttgat
ctgaacggcgctccgggcacgtacgcatattcgggcagcggcggcagcgggacgattcgg
agcggcggcaccgtggcgctcgcacatggagaggcgatcacgattgcaggcctgccgctg
ggaacaagttatacagtcgtcgaagcggattattccgcggagggatatacgacgacagac
actggggcatccggcgtcttcaactcgaccggaacccagagcgcggccttcgtgaacgtc
tatgaggcgaagaagcctgagcagccgacaccgggcggcgaggacggcggcagtaaggat
aacacgggcggcgaggacggcgggaaagacaacggcagcaaagataacatgagcggcgag
gacggcgggaaggacaacggcaatcaggatgacaagggcggcgaagacggcgggaaggac
aacggcagcaaggataacacgggcgggaaaagtgatggaggaggccaacaaccggggagc
ggtaatgggggcagctccggcggtgccggtgacaaatcgacggatggctcgactggcggt
aggactatcgcaaccggcagcggcggcaagacggaccacaaggtccaaacgggcaaggac
ggcacgccgaagaccggtgaccgcaacgacaggcagataggtcaattcgggttgattttc
ttcggagcggcgcttgctgcattaattgtcgcgaatgttatctcgcgtagaagaatcggc
aggaagcgttactaa
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integrated database retrieval system
