Paenibacillus rhizovicinus: GZH47_33615
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Entry
GZH47_33615 CDS
T06983
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
prz
Paenibacillus rhizovicinus
Pathway
prz03030
DNA replication
prz03430
Mismatch repair
prz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GZH47_33615 (dnaE)
03430 Mismatch repair
GZH47_33615 (dnaE)
03440 Homologous recombination
GZH47_33615 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prz03032
]
GZH47_33615 (dnaE)
03400 DNA repair and recombination proteins [BR:
prz03400
]
GZH47_33615 (dnaE)
Enzymes [BR:
prz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GZH47_33615 (dnaE)
DNA replication proteins [BR:
prz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GZH47_33615 (dnaE)
DNA repair and recombination proteins [BR:
prz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GZH47_33615 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QHW35832
UniProt:
A0A6C0PCZ6
LinkDB
All DBs
Position
unnamed2:complement(185711..189181)
Genome browser
AA seq
1156 aa
AA seq
DB search
MCIHVHLHVHSEHSALDGLSQVHELVERAKEIGSPALAITDHGVCGAIPDFISSCLKQGI
KPIPGCEAYMTKDRLLKGEFLKEKRTALLEKYNLKDKPLKQFIRHIERNPQDFETEARTL
LMDWIMNVQEDLFTIHQGKTADEQKIAEFREEIYDYLLYDNYHLVLIAVNNQGLEDLYEI
VSDAHINGFYSDPRTDLSFIRSHNLGANIIATSACLGSWLSRLALAGRMDEAKAFIQECK
ETFHSFYLEKQATMIPDQVRLNALLDQLAIETNTPKILTTDVHYAQKDDYDIHDILVASS
TGKCIHDEDRMRYAHEFWMKSEEEIRENWNDEEAIANTYKIAELVNVSLPDKPLLPRYPI
NGDETSEQLLEKMAWNGLFQKAMKYADVSAQIERYSQQLKYELGVINKLGFADYHLIVAD
FIQWAKNNGYLVGPGRGSAAGSLVCYCIQITTLDPIKHNLMFERFLDPERAEYPDIDIDF
SYAGARAVQMYLKEKYGIDRVAQIGTIGTLAARSAIRKVGKTLGFDLDTQDGFAKSISER
ALVTYSDKRSMLEQAYNDVNTPMVKVYADQYPDWWKAARKLEGHIDHVGTHAGGIVLSPD
KITKRVPLRLDKDALETTMFDMEWIEKLLVKFDILKIDALDVIKLTMEYAGIWGVVDIDD
IDLNDPKVYQDVYQALNLAGIFQCESDLYQGIIKEMRPSSFDDISVIVALGRPGPMDLIP
SYINRKFGRERIVYPVPELEEILKDTFGIWTYQEQIMKASIRLGGFTRGQSNILRKGISK
KKHDIMSKWIDLMIYGSEWYKQDRAKVAEIVASYANKDDVPSEIIIKYDPEYMKVPHLEG
AVNRGFSEEALLKIKADWVKFGDYCFNLAHSACYAKLSIQTAWLKTYYPVEFMAALMTIS
EGKKKENIPKNVIYMKECEEMKIKILPPDINRSNASWTPERKENIDFGDDSIGYIRYGLA
SIAGISSDTVEEIISKRPYESVEALVFLTNGVKVNKTKVVNLIKVGAFDSINKGRNQLLR
TFLQSKGDKKWEEISAQTNKKHILDYERELLGTSVTIKSRWDQIPEGKTDVHMTGVVFKY
DVLTSKKGNKYAEMWINTAEDVRKVVVFSKIINKHGDALRENIKVQVVGKKQKDDLVCDS
LTIMTRDNEKWEVDIA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatacacgttcatctgcatgtgcatagcgaacattctgcattggatggcttatcg
caagtgcatgaactggtcgaacgagcaaaagaaatcggaagccctgcgctggcaattacc
gaccacggtgtgtgtggggccattcccgattttatatcttcttgcctcaaacaaggcatt
aaaccgatccctggttgtgaagcatacatgaccaaggatcgtcttcttaaaggggagttt
ctcaaagagaagcgcacagcactcttggagaaatataatctgaaggacaagcccttgaag
cagttcattcgacatatcgaacgtaatccgcaggacttcgaaaccgaagctcgcacgctg
ctgatggattggatcatgaatgtccaggaggacctattcacgattcaccagggcaagacg
gctgacgagcagaagatcgctgagttccgtgaagaaatctatgattatctcttgtatgac
aactatcatctcgtcttgattgccgtaaacaatcaagggctggaggacctgtatgaaatt
gtttccgatgctcatatcaatggcttttattctgaccctcgcactgatctttctttcatt
cgcagccataatcttggggccaatattattgctacttctgcttgtttgggtagttggctt
agccgtcttgctctcgcaggaaggatggatgaagctaaagcgttcattcaggaatgcaaa
gaaacgtttcactcgttctacctcgaaaaacaagcaacaatgatccctgaccaggtgcgg
ctgaacgccctgctggatcaactcgctattgaaaccaatacgccgaagatcctcacgact
gatgtgcattacgcacaaaaagacgattatgatattcatgatattcttgtggcttcctcg
accggtaaatgcatccacgatgaagaccggatgcggtatgcgcatgagttctggatgaag
tccgaagaagagatccgtgagaattggaatgatgaagaagcgatcgccaatacatacaag
atcgctgagctcgtcaatgtctcactgcctgacaagccgctgctgccacgttatccgatc
aatggggatgagacaagcgagcagcttcttgagaagatggcctggaacggcttgttccaa
aaggccatgaagtacgctgatgtttcagctcaaattgaacgatactcccagcagctcaaa
tatgagcttggggtcattaataaactcggctttgccgattatcacctaatcgttgccgac
ttcatccagtgggcgaagaacaacggatacctcgttggaccaggacgtggctccgccgcc
ggttcactcgtctgctattgcattcagatcaccacgctggatccgatcaagcacaatctg
atgttcgagcgtttcctcgatccagaacgggcggaatatccggacatcgacattgacttc
tcttatgccggcgcccgtgccgtgcagatgtatcttaaagaaaaatatggtatcgatcgt
gtggcgcaaatcggtacgatcggcacactggcagctcgctccgctattcggaaagtcggt
aagacactcggctttgacttggatacacaagatggattcgccaaatcgatatccgaacgt
gcgctggtcacgtacagcgataagcggtcgatgctcgagcaggcctacaatgacgtcaat
acgccaatggttaaggtttatgctgatcagtacccggattggtggaaggctgccagaaaa
ctcgaggggcacatcgatcatgtcggaacacatgccggcggcatcgttctgtcaccagat
aagattacgaagcgtgtcccattgcggcttgataaagatgcacttgaaacgacaatgttc
gatatggaatggatcgaaaaattgctggtcaaattcgatatcctgaaaattgatgcgctc
gatgtcatcaagctgaccatggaatatgccggcatctggggcgtagtagacattgacgat
atcgatctcaatgatccgaaggtctatcaagatgtgtaccaggccctgaacctagctggc
attttccaatgcgaaagcgatctgtatcaagggattatcaaggagatgaggccatccagc
tttgatgacatctccgtcatcgtggcgcttggccggccaggccctatggacttgattccg
tcctacatcaatcgcaaatttggccgtgaacgcattgtctatccagtgccggaacttgaa
gagatcctgaaggatacgttcggcatttggacgtaccaggagcagatcatgaaggcctcg
attcgactcggaggattcacccgtggccagtcaaacattctgcgtaaagggatttcaaag
aagaagcacgacatcatgagcaaatggatcgatcttatgatctacggtagcgaatggtac
aagcaagaccgtgctaaggtcgcagagatcgttgccagttatgccaataaagacgacgtg
ccatccgaaattattatcaagtacgatccggaatacatgaaggttccgcacctggaaggc
gccgtaaatcgtggcttctctgaggaagcgctgctgaaaatcaaagctgactgggtaaag
tttggcgactactgctttaacctagcgcacagcgcctgctacgccaagctatcgattcaa
acggcgtggctgaagacttactaccctgttgagtttatggccgctctaatgaccatttct
gagggcaagaagaaggagaacattcctaagaacgtcatctacatgaaggaatgcgaagag
atgaagatcaagatcctgccgccggacatcaaccgctcaaatgcctcctggacaccggag
cgtaaagagaacattgatttcggtgacgacagcatcggttacatccggtatggtctggcc
agtattgccggcatcagctcggacacggtggaggagatcattagcaagcgaccatatgaa
tcggttgaagcgctcgtgttcctcacaaacggcgtgaaggtcaacaagaccaaggtcgtt
aacctaatcaaggttggcgctttcgattccattaacaagggacgcaaccagctgctgcgg
acgttcctgcagtcaaagggcgacaagaagtgggaagaaatctcggcgcagacaaacaag
aagcacatcctcgattacgagcgggagctccttggcacatcagttacgatcaagtccaga
tgggatcaaattccggaaggtaaaacggatgtccatatgaccggcgttgtcttcaaatac
gacgtgctgacctccaaaaaagggaacaagtacgctgagatgtggattaacacagcggag
gatgtccgcaaggttgttgtgttctcaaagatcatcaataagcatggggatgcgctgcgg
gaaaacatcaaagtacaagtggtcggcaagaaacagaaggatgatttggtctgcgactca
ctgacaatcatgaccagggacaacgagaagtgggaggtggacatcgcctaa
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