Stutzerimonas stutzeri A1501: PST_0113
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Entry
PST_0113 CDS
T00511
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03030
DNA replication
psa03410
Base excision repair
psa03420
Nucleotide excision repair
psa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PST_0113 (polA)
03410 Base excision repair
PST_0113 (polA)
03420 Nucleotide excision repair
PST_0113 (polA)
03440 Homologous recombination
PST_0113 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psa03032
]
PST_0113 (polA)
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_0113 (polA)
Enzymes [BR:
psa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PST_0113 (polA)
DNA replication proteins [BR:
psa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PST_0113 (polA)
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PST_0113 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PST_0113 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
ABP77821
UniProt:
A4VFS0
LinkDB
All DBs
Position
132958..135753
Genome browser
AA seq
931 aa
AA seq
DB search
MVLRILAPGPPKRLIPLMSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNML
LSLRRQYPDSPFAVVFDAKGPTFRDALFENYKSHRPPMPDDLRVQVEPLHASVRALGLPL
LCVEGVEADDVIGTLARQCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVK
AKFGVGPELIIDFLALMGDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYEHLDQVAGLP
IRGAKSLGAKLEEHRDAAFMSYELATIKIDVALDVEVGDLMPGEPHREALIALYRELEFK
QWLDELLREAKAAGENCEVQPEGCSIQAEAQYETLLEQADFERWLARLKAAECFAFDTET
TSLDAQRAELVGVSFAVEPGQAAYVPLRHSYMGVPQQLELDAVLSALKPLLEDPAKTKIC
QHGKYDMNVLMHYGIEMRGMAFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAG
KGAKQLTFDQIAIEQAGPYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLA
RIERNGALVDAQLLGQQSVELGDKLVQLEREAFDIAGEEFNLGSPKQLCAILYDKLGCPV
ISKTAGGQPSTAESVLAELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHT
SYHQAVTATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHL
AQDAGLLHAFQNDLDVHRATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQI
DVGRKEAQEYIDRYFARYPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRK
GAERTAINAPMQGTAADIIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEQVR
EAICPLMSGAAQLDVPLLVEAGVGNNWDEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
gtggtccttcgcattctagctccgggcccgccgaaaaggttgattccgctcatgagccaa
gcccccctcgtcctggtggacggttcgtcctacctgtaccgcgccttccacgcactgcct
ccgctgaccacctctaccggcaagccgaccggtgcggtcaagggtgtgctgaacatgttg
cttagcctgcgcaggcagtatccggacagcccgttcgcagtggttttcgacgccaagggt
ccgacctttcgcgacgcgctgttcgagaactacaagtcgcaccgcccgccgatgcccgac
gacctgcgcgtgcaggtcgagccgctgcatgccagcgtccgtgcactggggctgccgctg
ctgtgcgtggaaggggtcgaggcagacgatgtcatcggcaccctggcgcggcaatgcgcg
gcgctgggccgtgatgtggtgatctccaccggcgacaaggacatggcccagctggtctgc
ccgcacgtcaccctggtcaacaccatgaccggcagcgtctatgacatcgagggcgtgaag
gccaagttcggcgtcggcccggaactgatcatcgacttcctcgcgctgatgggcgacaag
gtcgacaacattcctggcgtgccaggcgtgggcgagaagacggcatgtggcctgctcaac
ggcatcccgggcgggctcaaggggctctacgagcacctcgaccaggtcgccgggctgcct
attcgcggtgccaagtcgttgggcgccaagctggaggagcatcgcgatgccgccttcatg
tcctacgagctggctacgatcaagatcgacgtggcgctggacgtcgaggtcggtgacctg
atgcccggtgaaccgcaccgcgaggcgctgatcgccctctaccgcgagctggagttcaag
cagtggctggacgagctgctgcgcgaggccaaggcggcgggggagaactgcgaggtgcag
ccagaaggctgttcgatccaggccgaggcccagtacgagaccctgctggagcaggccgat
ttcgagcgctggctggcgcgtctgaaggcggccgaatgttttgccttcgataccgaaacc
accagcctcgatgcgcagcgcgccgagctggtcggcgtgtctttcgccgtggagccgggc
caggcggcttacgtgccgctgcgccattcctacatgggcgtgccgcagcagcttgagctg
gatgccgtgctcagcgcgctcaagccgctgctagaagatccggccaagaccaagatctgc
cagcacggcaaatacgacatgaacgtgctgatgcactacggcatcgagatgcgcggcatg
gctttcgacaccatgctcgaatcctacgtgctggacgccacggccactcgccacgacatg
gacagcctggcgctcaagtacctcggccgcggcaccatccgcttcgaggacattgccggc
aagggcgccaagcagctgaccttcgaccagatcgccatcgagcaggccggcccgtatgcc
gccgaggacgccgacgtcaccctgcgcctgcaccagaccctgctcggcaagctggagcag
acgccatcgctgctcaaggtgctgaccgagatcgagatgccgctggtgccggtgctggcg
cgcatcgagcgcaacggcgcgctggtcgatgcacagttgcttggccagcagagcgtcgag
ctgggcgataagctggtgcagctggaacgcgaggcgttcgacatcgctggcgaggagttc
aacctcggctcgcccaagcagctctgcgcgattctctacgacaagctcggctgcccggtg
atctccaagaccgccggcggccagccgtcaacggccgagagcgtgctggccgaactggcc
gagcaggattacccgctgccaaaggtcatcatgcagcaccgcagcctgagcaagctcaag
ggcacctacaccgataagctgccgcagcagatcaacccgcgcaccgggcgcatccacacc
agctaccaccaggcggtgaccgccaccggccggctgtcctccagcgacccgaacctgcag
aacatcccgatccgcaccgccgaggggcggcgcattcgccaggccttcgtcgcggcgccg
ggctacaagctactggcggcggactactcgcagatcgagctgcgcatcatggcccacctg
gctcaggatgccggcctcttgcacgcgttccagaacgacctggacgtgcaccgcgccacg
gccgccgaggtgttcggcgtaccgctggagcaggtcagcaacgaccagcgccgcagcgcc
aaggccatcaacttcggccttatctacggtatgagcgccttcggcctggccaagcagatc
gacgtcggccgcaaggaagcgcaggagtacatcgaccgctatttcgcccgctaccccggc
gtgctcgcctacatggagcgcacccgcacccaggccgcggagcagggctatgtcgagaca
ctgttcggtcggcggctgtacctgccggagatcaattcgaagaacggcgccatgcgcaag
ggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcagcggacatcatcaag
cgcgccatgatcgccgtggacggctggctgcaggacagcgggctggatgcgcgggtgatc
ctgcaggtccacgatgaattggtgctggaagtgcgcgaagacctggtcgaacaggtccgc
gaagccatctgcccgctgatgagcggggccgcccagctggacgtgccgctgctggtcgag
gcgggcgttggcaacaactgggacgaggcgcactga
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