Stutzerimonas stutzeri A1501: PST_0848
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Entry
PST_0848 CDS
T00511
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psa
Stutzerimonas stutzeri A1501
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_0848 (sbcD)
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PST_0848 (sbcD)
Archaeal homologous recombinant proteins
PST_0848 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABP78545
UniProt:
A4VHU4
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All DBs
Position
complement(943693..945099)
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AA seq
468 aa
AA seq
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MRGATCSPGRGKRGAPEPSAEAHDSHECHTPYIRRNFPPHKPSQRFAAAPAHNEPEPMRL
IHTSDWHLGQTLHSQDRDHEHAQFLAWLLDQLVAHRADALLIAGDVFDTVNPPLKAQEHL
YDFIVRAHEKLPQLDIVMIAGNHDSGGRIELPAPLMKRLNAHAVGRISWVAEGQLDHQRL
LVPLHDAAGNTAAWCLTLPFLRPAEVTGMALGDDYMAGIRQVHERLIAAAEAVRQPGQAL
VAMSHAHMAGGAVSEESERNIVIGNAEALPASLFPESVAYVALGHLHKPQQVAGQARIRY
SGSPLPLSFAEVNYPHQVLLVELDGEALKQVDSLAVPRAVEMIRIGRAPLAEVIAALEAL
PPTGLFDEHLPWLEVRVLLDEPLPDLRQRIETAITGKACRLVRIASEYDGKRGETESEVL
LGLDQITPQELFARAWEEQYGNPADEQALDDFATLLQRVEFAHTEDDR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaggcgcaacctgtagtccgggccgaggaaagcgcggcgcgcccgaaccgtccgcc
gaagcccacgacagtcacgagtgccacacgccttacatccgacgcaacttcccgccgcac
aaaccaagccagcggttcgccgcggcgcccgcacacaatgagcctgagcccatgcgcctg
atccacacctccgactggcacctcggccagacactccacagccaggaccgcgaccacgaa
cacgcgcagttcctcgcctggctgctcgaccagctggtagcccaccgcgccgacgccctg
ctgatcgccggcgacgtgttcgacacggtcaacccgccactcaaggcccaggagcacctc
tacgacttcatcgtccgcgcccacgaaaagctcccgcagctggacatcgtgatgatcgcc
ggcaaccacgactcgggcgggcgcatcgagctgccggcgccgctgatgaagcgcctcaat
gcccatgccgtcggccgcatcagctgggtcgccgagggccagctggatcaccagcggctg
ctggtgccgctgcacgacgccgctggcaacaccgccgcctggtgcctcaccctgcccttc
ctgcgcccggccgaggtcaccggaatggcgctgggcgacgactacatggccggcattcga
caggtgcatgaacgcctcatcgccgccgccgaggccgtgcgccagcccggccaggcgctg
gttgccatgagccatgcgcacatggccggcggcgcggtctcggaggagtccgagcgcaat
atcgtcatcggcaatgccgaggccctgccggccagcctgtttcccgagtccgtcgcctac
gtcgccctcggccacctgcacaagccgcagcaggtcgccgggcaggcccgcatccgctat
agcggctcgccgctgccgctgtccttcgcggaggtcaattacccgcaccaagtgctgctc
gtcgagctcgatggcgaggccctgaaacaggtcgacagcctggcggtgccgcgtgcggtg
gagatgatccgcatcggccgcgccccgctggccgaggtgatcgccgcgctggaggcgctg
ccgcccaccggcctgttcgacgaacatctgccctggctggaggtacgcgtgctgctcgac
gaaccgctgccggacctgcgccagcgcatcgaaaccgcgataaccggcaaggcctgccga
ctggtgcgcatcgccagcgaatacgacggcaagcgcggcgagacggaatcggaagtgctg
ctcggcctcgaccagatcaccccgcaggaactgttcgcccgcgcctgggaagaacagtac
ggcaacccggcggatgaacaggcgctggacgatttcgctaccttgctgcaacgggtcgag
ttcgcccatacggaggacgaccgatga
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