Stutzerimonas stutzeri A1501: PST_1552
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Entry
PST_1552 CDS
T00511
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03030
DNA replication
psa03430
Mismatch repair
psa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PST_1552 (dnaE)
03430 Mismatch repair
PST_1552 (dnaE)
03440 Homologous recombination
PST_1552 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psa03032
]
PST_1552 (dnaE)
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_1552 (dnaE)
Enzymes [BR:
psa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PST_1552 (dnaE)
DNA replication proteins [BR:
psa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PST_1552 (dnaE)
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PST_1552 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
ABP79237
UniProt:
A4VJT6
LinkDB
All DBs
Position
1664504..1667899
Genome browser
AA seq
1131 aa
AA seq
DB search
MSNMCSLVKFYKTAQGAGIKPICGADIWLAGCDEDGPLSRLTLLAMNPKGYRNLTELISR
GWTEGQRNDLVIIEREWVKEAAEGLIALSGAKEGEIGHALLNGDEALAASRLAEWREVFA
DRFYLEVQRTNRVNDEEHLHAAVALAERSGAPLVATNDVRFLKQEDFEAHETRVCIGEGR
TLDDPRRPRTYSDQQYLKTPEEMAELFADLPEALENTVEIAKRCNIEVQLGTYFLPNFPV
PEGMTIDDYLRQVSFEGLEERLEVLLPKDTPDYEAKKQVYIDRLEFELGTIIQMGFPGYF
LIVMDFIKWAKNNGVPVGPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPD
FDVDFCMDGRDRVIDYVAEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSK
MIPFEVGMTLEKAYEMEEPLRDFLAVDEDAREIWEMALKLEGITRGTGKHAGGVVIAPTK
LTDFAPIACDEEGGGLVTQFDKDDVEQAGLVKFDFLGLRTLTIIKWALETINREQAKKGL
EPVNIDFIPLDDKPTYQLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPG
PLQSGMVDDFINRKHGRAEVSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYT
LGGADMLRRAMGKKKPEEMAKQRGGFIEGCANNGIDADLAGNIFDLVEKFAGYGFNKSHS
AAYGLVSYQTAWLKAHHPSPFMAAVLSADMHNTDKVVILIEECRSMKLRIDPPDVNVSEF
KFTVNDDGRIVYGLGAVKGVGEGPVDAIAECRAEGGPFKDLFDFCARIDLKRINKRTLEA
LIRSGALDRLGPYFFEEAKAYQANIDRNRAVLLAAMEEAVQAAEQTARSAESGHMDLFGG
LFAEPEADVYGNHRNARELSLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLR
PARGEQTIAGLIVNLRVMKNKKGDKMGFITLDDRSGRIEASLFAEAFNSAQALLQTDALV
VVEGEVSNDDFSGGLRLRAKRVMSLEEARTGLAESLRVKVAGEALKGERMRWLAEVCGRH
RGACPITLEYTGHDARALLQFGEDWRIDPADNLIQALRDQFGRDNVFLQYR
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacatgtgctcgctggtgaagttctacaagacggcgcagggcgccggaatcaaa
ccgatctgtggcgccgatatctggctggctggctgcgacgaggatggtcctctcagccgc
ctgacgctgctggcgatgaaccccaagggatatcgcaatctcaccgagttgatttctcgc
ggctggaccgaaggccagcgcaacgatctggtcatcatcgagcgggagtgggtcaaggaa
gcggccgaagggctgattgcgctttccggtgccaaggaaggggagatcggccacgctctg
ctcaatggcgacgaagcgctggcggcgtcgcgtcttgccgaatggcgcgaggtattcgcc
gatcgcttctacctggaagtgcagcgcaccaatcgggtcaatgacgaagagcatctgcat
gcggccgtggcgctggccgagcgcagcggcgcgccgctggtggcgaccaacgacgtgcgc
tttctcaaacaggaagacttcgaggcgcatgaaacccgcgtctgcatcggtgaagggcgc
actctggacgacccgcgtcgcccgcgtacttattccgatcagcagtacctgaagacgccc
gaggagatggccgagctgttcgccgacctgcccgaggcgctggaaaacaccgtcgagatc
gccaaacgctgcaacatcgaagtgcagctgggcacctacttcctgccgaacttcccggtt
cccgaaggcatgaccatcgacgactacctgcgtcaggtctcgttcgagggcctggaggag
cgcctggaagtcctgctgccaaaggacacgccggactacgaggcgaagaagcaggtctat
atcgaccgcctcgagttcgaactgggcaccatcattcagatgggctttcccggttacttc
ctgatcgttatggacttcatcaagtgggccaagaacaacggcgtgccggtcggcccgggc
cgcggttcgggtgccggctcgctggtggcctacgtgctgaagatcaccgacctcgatccg
ctggcctacgacctgctgttcgagcgcttcctcaaccccgagcgtatttccatgcccgac
ttcgacgtcgacttctgcatggacggccgcgaccgggtcatcgattacgtggccgaagcg
tacgggcgcaatgcggtgagccagatcatcaccttcggcaccatggcggccaaggcggtg
gtgcgtgacgtggcgcgggtccagggcaagtcctatggcctggccgaccgtctgtcgaag
atgattcctttcgaggtgggcatgaccctcgagaaggcctacgagatggaagagccgctg
cgcgacttcctcgccgtcgacgaggatgcccgcgaaatctgggagatggcgctcaagctc
gaaggcatcacccgcggtaccggcaaacacgccggtggtgtggtgatcgcgccgaccaag
ctcaccgacttcgcgccgatcgcctgtgacgaggagggcggcggactggtgacccagttc
gacaaggacgacgtcgagcaggccggcctggtgaagttcgacttcctcggcttgcgcacc
ctgaccatcatcaaatgggcgctggagaccatcaaccgcgagcaggccaagaagggcctg
gaaccggtcaacatcgacttcatcccgctggacgacaagccgacctaccagctcctgcag
aaggccgagaccacggccgtgttccagctcgaatcgcgcggcatgaaggagctgatcaag
aagctcaagcccgactgtctggaagacctcatcgcgctcgtggccctgttccgccccggc
ccgttgcagtcgggcatggtggacgacttcatcaaccgcaagcacggccgtgcggaagta
tcctatccgcacccggactatcagtacgccgggctggagccggtactcaagcccacctac
ggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtgatggccggctacacc
ctcggtggcgccgacatgctgcgccgcgccatgggtaagaaaaagccggaggaaatggcc
aaacagcgcggtggcttcatcgagggttgcgccaacaacgggatcgatgcggacctggca
ggcaacatcttcgatctggtggaaaaattcgccggctacggcttcaacaagtcgcactcg
gccgcctacggcctggtgtcctaccagacggcctggctcaaggcgcaccacccttcgccg
ttcatggcggccgtgctctcggcggatatgcacaacaccgacaaggtggtgatcctcatc
gaggaatgccgcagcatgaagctgcgcatcgatccgcccgatgtgaacgtctccgaattc
aagttcaccgtcaacgacgatggccgtatcgtctatggcctgggtgcagtgaagggcgtg
ggtgaggggccggttgacgctatcgccgaatgccgtgccgaaggcggcccgttcaaggat
ctgttcgatttctgcgcacgcatcgacctcaaacgcatcaacaagcgcaccctggaagcg
ctgatccgctccggcgcgctggaccgcctggggccgtacttcttcgaggaggccaaggcc
tatcaggccaacatcgaccgcaatcgcgcggtactgctggcggcgatggaagaggcggtg
caggccgccgaacagacggcgcgcagcgccgagagcggtcacatggacctgttcggcggc
ctgttcgccgagccggaggccgacgtctatggcaatcaccgcaacgcccgcgagctgtcg
ctcaaggaacgtctgaaaggcgagaaggacaccctcggcctgtacctcaccggccatccg
atcgacgagtacgagggcgagatccgtcgcttcgcccgccagcgcatcatcgatctgcgc
ccggcgcgtggcgaacagaccatcgccgggctgatcgtcaatttgcgagtgatgaagaac
aagaagggcgacaagatggggttcatcaccctggacgaccgctccgggcgcatcgaggcc
tcgttgttcgccgaagcgttcaacagcgcccaggccctgctgcagaccgatgcgttggta
gtggtggagggcgaggtgagcaacgatgatttctctggcggtctgcgcctgcgagccaaa
cgtgtcatgagcctggaggaagcgcgtaccgggctggccgagagcctgcgggtcaaggtc
gccggcgaggcgctcaagggcgaacgcatgcgctggctggccgaggtctgcggtcgccat
cgcggggcctgtccgatcacgctggagtacaccggacatgatgcacgggcgctcctgcag
ttcggtgaggattggcggatcgatccggcggacaacttgattcaggcattgcgtgaccag
ttcggacgcgacaacgtcttcctgcaataccgatag
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