Stutzerimonas stutzeri A1501: PST_2162
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Entry
PST_2162 CDS
T00511
Name
(GenBank) KU domain protein
KO
K10979
DNA end-binding protein Ku
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PST_2162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_2162
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PST_2162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF2483
Motif
Other DBs
NCBI-ProteinID:
ABP79827
UniProt:
A4VLH6
LinkDB
All DBs
Position
complement(2350809..2351765)
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AA seq
318 aa
AA seq
DB search
MPRTIWKGAVSFGLVHIPVALVPATTRQGIDFDWLDKRSMDRVGYKRINKTTGEDIDSEN
IVKGVEYEKGHYVVISDDEIKAAHPKATQTVDIVAFVDAKDISFLYIDTPYYLTPDRRGE
KVYALLRETLIQTGKVGIANVVLRNKQHLAVVMPLGKALVMNTLRWADEVRGVEYLELKD
EALDPDLAERELDMAKRLVEDMTEKWKPEQYKDTFQDQIMDLVEKKAREGKLEAVGGPEE
AVDRRSADVIDLTELLKRSLAAKPGKARAAEADEEDDVPEKAPAKSKPASKAKTSKSSSS
SRTRKAPAASSKSSKKAS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcacgatctggaaaggcgcggtcagtttcggactggtacacatcccggtggcg
ctggtgccggccactacacggcagggcatcgatttcgactggctggacaagcgcagcatg
gatcgggtcggttacaagcgcatcaacaagaccactggcgaggacatcgacagcgagaac
atcgtcaagggcgtcgagtacgagaagggccactacgtggtcatcagcgacgacgagatc
aaggcggcgcatcccaaggccacgcagaccgtggacatcgtcgccttcgtcgacgccaag
gacatctcctttctctacatcgacacgccgtactacctgaccccggaccggcgcggggaa
aaggtctatgcgctcttgcgcgagacgctgatccagaccggcaaggtcggcatcgccaac
gtggtgctgcgcaacaagcagcatctggcggtggtgatgccgctgggcaaggcgctggtg
atgaacaccctgcgctgggccgacgaggtgcgcggcgtcgagtacctcgaactgaaggac
gaagcgctcgatccggacctggccgagcgcgaactggacatggccaagcgtctggtggaa
gacatgaccgagaagtggaagccggagcagtacaaggacaccttccaggaccagatcatg
gacctggtggagaagaaggctcgcgaaggcaagctggaagccgtgggcgggccggaagag
gcggtggatcgccgctcggcggatgtcatcgacctcaccgagctgctcaagcgcagcctg
gctgccaagccgggcaaggcgcgcgccgccgaggcggacgaagaggacgatgtgccggaa
aaggcgccagccaaatccaagcctgcgagcaaggccaagaccagcaagtcgtccagctcg
tcacgcacacgcaaggcaccggcggcgagcagcaaatccagcaagaaggccagctga
DBGET
integrated database retrieval system
