Stutzerimonas stutzeri A1501: PST_2467
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Entry
PST_2467 CDS
T00511
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PST_2467 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psa03019
]
PST_2467 (recQ)
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_2467 (recQ)
Enzymes [BR:
psa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PST_2467 (recQ)
Messenger RNA biogenesis [BR:
psa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PST_2467 (recQ)
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PST_2467 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
HTH_23
ResIII
HTH_31
HTH_7
HTH_20
GerE
HTH_29
PAX
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
ABP80119
UniProt:
A4VMB8
LinkDB
All DBs
Position
complement(2692840..2694963)
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AA seq
707 aa
AA seq
DB search
MLDQAQRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLREGLA
VVVSPLIALMDDQVATLDELGVSAVALNSTLSTDEQRDIAERIRRGEIKMLYLAPERLVQ
PRMLAFLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLAELFPNVPRIALTATADKRT
REEIVQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKK
VDDLAAFLTEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDEELPRPCGHCDNCVDGVQTWDATEPARQALSAIYRSG
QRYGVGHLVDVLLGRDNDKVRGLGHQHLSVFGVGKALSEGEWRSLFRQLVARGLADVDLE
GFGGLRLSDSCRPLLRGEVTLELRRDLSSKAPKPASSAASQLVRSEERETWEALRTLRRK
LAEEHSVPPYVIFPDATLLEMLRSQPASLADMARISGVGARKLERYGQAFLEVLQGTVEV
VRSPADLRHELVTLARAGMTPAQIARQLDCSEKNVYTLLAEAIGKQQLSLEQALDLPEDL
LGEIQEAFLDGEGELPPVGDVAPLFAGRVPEQVLYCVRAALQAEFEL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccaggcacagcgcatcctcaaagacgtatttggctacgacgcctttcgcggc
aaccagggcgcgatcatcgagcgtgtgggcagtggcggcgatgcgctggtattgatgccg
accggcggcggcaagtcgctctgctatcaggttccggcgctcttgcgcgaggggctggcg
gtggtggtttcgccgctcatcgcgctgatggacgatcaggtcgccacgctcgatgagcta
ggcgtctcggccgtcgccctcaactcgacgttgagcacggacgagcagcgcgacatcgcc
gagcgtatccgtcgcggcgagatcaagatgctctacctggcgcccgaacgcctggtccag
ccacgcatgctggccttcctgcagcggctcgagatcgccctgttcgccatcgacgaagcg
cattgcgtgtcccagtggggccatgatttccgtcctgagtacatgcagctgggccagctc
gccgagctgtttcccaacgttccgcggatcgccctgaccgccacggcggacaagcgcacc
cgcgaggaaatcgttcagcgcctgcatctggaaaatgccgagcggttcctctccagcttc
gaccggccgaacatcttctatcgcatcgtgcccaaggaacagccacgcaagcagctgctg
ggctttctcgccgagcgccgcggcgacgccggcatcgtctactgcatgtcgcgcaaaaag
gtcgatgatctggccgccttcctcaccgaacagggctttccggcgctgccttatcacgcg
ggcttgcccaatgagctgcgcgcctatcaccagaagcgctttctcaacgaggaagggctg
atcatggtggcgaccattgccttcggcatgggcatcgacaagcccaacgtgcgtttcgtc
gcccacctcgacctgcccaagtcgctggaggcctactatcaggaaaccggtcgggcaggg
cgtgacgggctaccggccgacgcctggatggcctatggcctgcaagatgtaatcttcctc
aagcagatgctcaacaattccgagggtgatgagcggcacaagcgggtcgagcagcacaag
ctcgatgcaatgctggcgctctgcgaggaaacccgttgccgacgccaggcgttgctggcg
tacttcgacgaagagctgcccaggccttgcggccattgcgacaactgcgtcgacggggtg
cagacctgggacgccaccgagcccgctcgccaagcgctttcagccatctatcgcagtggt
cagcgctatggcgtcgggcatctggtggatgtcttgctgggacgcgacaacgacaaggta
cgcggcctcggccatcagcatctgtcagtgttcggcgtcggcaaggcgttgtccgagggt
gaatggcgctcgctgttccgccagctggtcgcccgcggtttggccgatgtcgatctcgaa
ggctttggcggcttgcggttgagcgatagctgccgcccgctgctgcgtggtgaagtcacc
ctcgagctgcgccgggatctatccagcaaagcgccgaaaccggcatccagtgccgccagc
caattggtgcgcagcgaggagcgcgagacctgggaggcgttgcgtacgctgcggcgcaag
ctggccgaagagcacagcgtgccgccctatgtgatctttccggacgccaccctgctggaa
atgctgcgcagccagccggcgtcgctcgcggacatggcgcgcatcagcggcgtcggcgcg
cgcaagctggagcgctacggccaggcctttctcgaggtcttgcagggtacagtcgaggtg
gtcaggtcgccggctgacctacgtcatgaactcgtgaccctggcccgcgccggcatgacg
ccggcgcagatcgcgcgccagctcgattgcagcgagaagaacgtctacacgctgctcgcc
gaggccatcggcaagcagcagctgagcctggagcaggcgctcgacctgccggaagacctg
cttggcgagattcaagaagcctttctcgacggcgagggcgagctgcctccggtgggggat
gtggcaccgctgttcgccggacgggtcccggagcaggtgctctattgcgtgcgcgctgcg
ctgcaggccgagttcgaattgtaa
DBGET
integrated database retrieval system
