Stutzerimonas stutzeri A1501: PST_2507
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Entry
PST_2507 CDS
T00511
Name
(GenBank) ATP-dependent RNA helicase, DEAD box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PST_2507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psa03019
]
PST_2507
03009 Ribosome biogenesis [BR:
psa03009
]
PST_2507
Enzymes [BR:
psa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PST_2507
Messenger RNA biogenesis [BR:
psa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PST_2507
Ribosome biogenesis [BR:
psa03009
]
Prokaryotic type
rRNA helicases
PST_2507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
HEM4
TrkA_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABP80159
UniProt:
A4VMF8
LinkDB
All DBs
Position
complement(2735545..2737206)
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AA seq
553 aa
AA seq
DB search
MTQEIGGFAALGIHSAVLAAISAVGYEEPSPIQAQAIPVILGGHDMIGQAQTGTGKTAAF
ALPILSKIDPAKREPQALILAPTRELALQVATAFETYSKQMPGVSVVAIYGGAPMGPQLK
AIRQGAQVIVATPGRLVDHLSRNSELLSTIRFLVLDEADEMLKLGFMDDLEVIFEAMPES
RQSVLFSATLPHSIRAIAEKHLREPQHIKIAAKTQTVARIEQAHLMVHADQKIQAVLRLL
EVEDFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV
ATDVAARGIDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTNQKVAEARLPNAQQVLDARIKKLTSSLAPLVADAETTHGELLDKLVADIGCSPRAL
AAALLRKATNGQALTLAEVEKEQPLVPTSGPRERSDRPERSGDRERRAPVPLAEGRARCR
TPLGARDGIAARNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLDRLLGKLKDTRV
GGKQLKLRRYRED
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcggcggctttgccgcactcggtattcactccgctgttctggctgcc
atcagcgcagtcggctacgaagaaccgtcccccatccaggcccaggcgatcccggtgatc
ctcggtggccacgacatgatcggccaggcccagaccggtaccggcaagaccgccgccttc
gcgctgccgatcctgtccaagatcgatccggccaagcgcgagccgcaggcgctgatcctc
gcgccgacccgcgaactcgcgctgcaggttgccaccgcgttcgaaacctattccaagcag
atgccgggcgtcagcgtcgtcgccatctacggtggtgccccgatgggcccgcagctcaag
gccatccgccagggcgcgcaggttatcgtcgccactccgggccgcctggtcgaccacctg
agccgtaacagcgagctgctgtcgaccatccgcttcctggtcctcgacgaagccgacgag
atgctcaagctcggcttcatggacgatctggaagtgatcttcgaagccatgccggaaagc
cgccagagcgtgctgttctccgccacgctgccgcactccatccgtgccatcgccgagaag
cacctgcgcgagccgcagcacatcaagatcgctgccaagacccagaccgtcgcgcgcatc
gaacaggcgcacctgatggtccacgccgaccagaagatccaggccgtgctgcgcctgctg
gaggtcgaggatttcgatgcgctgatcgccttcgtgcgcaccaagcaggccaccctcgac
ctggccgccgcgctggaagccaagggctacaaggccgctgcgctgaacggcgacatcgcg
cagaaccagcgtgaacgcgtcatcgaatcgctcaaggatggccgcctggacatcgtcgtc
gccaccgacgtcgccgcccgtggtatcgacgtaccgcgcatcacccacgtgttcaacgtg
gacatgccgtacgatccggagtcctacgtgcaccgcatcggccgtaccggccgtgccggt
cgcgaaggtcgcgcgctgctgctggtcactccgcgtgagcgtcgcatgctgcaggtcatc
gagcgggtaaccaaccagaaggtcgccgaagcccgtctgcccaatgcccagcaagtgctg
gatgcccgtatcaagaagctgaccagcagcctcgcgccgctggtcgccgatgccgaaact
actcatggcgagttgctcgacaagctggttgctgacatcggctgcagcccgcgtgctctg
gccgctgcgttgctgcgcaaggccaccaatggtcaggcgctgactcttgcggaagtggag
aaagagcagccgctggtccccaccagtggtccgcgcgagcgttccgatcgtccggagcgc
agtggcgatcgtgagcgtcgcgcacccgtacccctggccgaaggccgcgcccgctgccgt
acgccgctgggcgcacgcgacggtatcgctgcccgcaacctgctcggcgccatcctcaac
gagggcggccttgcgcgcgaagccatcggccgcatccaggtgcgtgacagcttcagcctg
gtcgaactgccggaagatggcctcgatcgcctgctcggcaagctcaaggacacccgcgtc
ggcggcaagcagctcaagctgcgccgttatcgcgaagattga
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