Stutzerimonas stutzeri A1501: PST_3306
Help
Entry
PST_3306 CDS
T00511
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PST_3306 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psa03019
]
PST_3306 (pnp)
03016 Transfer RNA biogenesis [BR:
psa03016
]
PST_3306 (pnp)
Enzymes [BR:
psa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PST_3306 (pnp)
Messenger RNA biogenesis [BR:
psa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PST_3306 (pnp)
Transfer RNA biogenesis [BR:
psa03016
]
Prokaryotic type
tRNA degradation factors
PST_3306 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
KH_PNO1_2nd
S1_2
KH_N4BP1_2nd
Motif
Other DBs
NCBI-ProteinID:
ABP80937
UniProt:
A4VPN6
LinkDB
All DBs
Position
complement(3578587..3580692)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAVSGIPFDGPIGAARVAFHPETGYLLNPNYEQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVEELAAEAGKPRWDWTAPQAN
TALLDAIRSEFGAAISEAYTITIKQQRYARLDELREQVVAKFSGEEGQPSGGEVKDAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLAIEVGVLDKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDAFMLHYNFPPYSVGECGRMGATGRREIGHGRLARRGVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEIALGQALEARLNILGQMSQ
VIAQSRSELSANAPTMLAMKIDQDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDQRI
EKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtaatcaagaagtttcagttcggtcagtcgaccgtaaccctcgagacgggt
cgcatcgcccgccaggcctccggcgccgtgctggtcaccgtcgatgacgacgtcagcgtg
ctggtcaccgtggtcggtgccaagaccgccgatccgagcaaggggttcttcccgctctcc
gtgcattaccaggagaagacctacgcagccggcaagatccccggcggcttcttcaagcgt
gaggcgcgtccttccgagaaggaaaccctgacctcgcgtctgatcgatcgtccgatccgt
ccgctgttcccggaaggcttccagaacgaagtgcaggtcatctgcaccgtcgtctccacc
agcaagaagactgacccggacatcgccgcgatgatcggtacttcggctgctctggccgtt
tccggtattccgttcgacggccccatcggcgccgcgcgcgtggccttccatccggaaacc
ggctacctgctgaacccgaactacgagcagctcaaggcctccagcctggacatggtcgtg
gccggcaccaaggacgccgtgctgatggtcgagtcggaagccaaggagctgaccgaagac
cagatgctgggcgctgtgctgttcgctcatgacgagttccaggccgtgatcaaggccgtg
gaagaactcgccgccgaagccggcaagccgcgctgggactggaccgctccgcaggccaac
accgcgctgctggatgccatccgcagcgagttcggtgccgccatctccgaagcctatacc
atcaccatcaagcagcagcgctatgcccgtctggacgagctgcgcgagcaggttgtggcc
aagttctccggtgaggaaggtcagccttccggcggcgaagtgaaggatgccttcggcgaa
atcgagtaccgcaccgtgcgcgagaacatcgtcaacggcaaaccgcgtatcgacggtcgc
gacacccgtaccgtgcgtccgctggccatcgaagtcggcgtgctggacaagacccacggc
tcggcactgttcacccgtggcgaaacccaggcgctggtcgtcgccaccctcggtaccgca
cgcgacgctcagctgctggataccctggaaggcgagaagaaagacgccttcatgctgcac
tacaacttcccgccctattcggtcggcgagtgcggtcgcatgggcgctaccggacgccgc
gagatcggccatggccgtctggcccgtcgtggcgtcgccgccatgctgccgagtgccgac
gagttcccgtacaccattcgcgtggtgtcggagatcaccgaatccaacggctccagctcc
atggcgtcggtctgcggtgcctcgctggcgctgatggatgccggtgtaccgatgaaggcg
ccggttgccggtatcgccatgggtctggtcaaggaaggtgagaagttcgcagtcctgacc
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtactgcc
aagggcgtgaccgctctgcagatggacatcaagatccagggcatcaccgaagagatcatg
gagatcgccctgggccaggccctggaagcgcgtctgaacatccttggccagatgagccag
gtcattgcccagtcgcgcagcgagctgtcggccaacgcaccgaccatgctggcgatgaag
atcgatcaggacaagatccgcgacgtgatcggcaagggtggcgccaccattcgtgcgatc
tgtgaggagaccaaggcatcgatcgatatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggccgaggcggccaagcagcgcgtgctgagcatcacggccgaagcc
gagatcggcaagatttacgtcggcaaggttgagcgcatcgtcgacttcggtgccttcgtc
aacatcctgccgggcaaggatggcctggtgcacatctcgcagatcagcgatcagcgcatc
gagaaagtcaccgatgtgctgaaagaaggtcaggaagtgaaggtgctggtgctggacgtg
gataaccgcggccgcatcaaactgtccatcaaggacgtggctgcagcggaagcctcgggc
gtctga
DBGET
integrated database retrieval system
