Stutzerimonas stutzeri A1501: PST_3712
Help
Entry
PST_3712 CDS
T00511
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
psa
Stutzerimonas stutzeri A1501
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psa03019
]
PST_3712
Enzymes [BR:
psa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PST_3712
Messenger RNA biogenesis [BR:
psa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PST_3712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
CON_HrpB
DEAD
ResIII
AAA_30
Flavi_DEAD
DUF5401
Motif
Other DBs
NCBI-ProteinID:
ABP81335
UniProt:
A4VQT4
LinkDB
All DBs
Position
complement(4012454..4014979)
Genome browser
AA seq
841 aa
AA seq
DB search
MNSLPIDEVLPALRQALQQRDEAVLEAPPGAGKTTRVPLALLGEAWLAGQTIIMLEPRRL
AARAAAERLASELGERVGETVGYRIRLDSKVGPNTRIEVVTEGILARRLQDDPALGGVGL
VIFDEFHERSLDADLALALTLNARQLLRDEPLKLLLMSATLEGQRLSALLDEAPVVRSEG
RMHPVEQRWGRPLAPGERIEPRVVQTVLQALQDERGSVLVFLPGQAEIRRVNEALAEQLE
GRGDILLCPLHGELELAQQRAAIEPAPAGLRKVVLATNIAETSLTIEGVRVVVDAGLARV
PRFDPGSGMTRLETRRISRASATQRAGRAGRLEPGACYRLWSEEQHGQLAAYGEAEILQA
DLAGVALQLARWGVEPDELAWLDRPPAAAYGQAQALLERLGALQRSEHGGWQLTRHGQAM
AELPVHPRLAHMLLRGQALGVAALAADVAALLVERDIQSGGQRGGGADLALRLHQLQDGR
GAGVQRVRQLARQFRSLLRAAAAAPAAELDEQHALAALLAFAYPDRVARQRREGGGGYRL
ANGRAAQFGEPDPLMKESWLVIAELGSHQGQREERIYRAVALDPALFESALAEQVAVRDE
LEWDEREGVLRAERQRRVGELVLSREPLPTLDEEARGKALLALVRRKGLELLAWTPELRQ
WQARIGLLRQLELDAGDTSDWPDVSDAALLARLEDWLLPYLGKVTRLAHFAQLDLAAMLA
TLLPWPLPQRLEEQAPVAVTVPSGSRIRLDYSEQPPVLAVRLQELFGLADTPRIAAGRQV
VKLHLLSPARRPVQVTQDLASFWANTYAEVKKDLKGRYPKHYWPDDPLIAEPTARAKPRG
Q
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaattccctaccgatcgacgaagttctgccggcgttgcgccaggccctgcagcagcgc
gacgaagccgtgctcgaggcgccgcccggcgccggcaagaccacccgcgtgccgctggcg
ctgctcggcgaagcctggctggccgggcagaccatcatcatgctcgaaccgcgccggctg
gccgcccgcgccgccgccgaacgcctggccagcgagctgggcgagcgggtcggcgagacg
gtgggctaccgcatccgcctggacagcaaggtcgggccgaacacccgcatcgaggtggtc
accgagggcatccttgcgcgccgcctgcaggacgacccggcactgggaggcgtcgggctg
gtgatcttcgacgaattccacgagcgcagcctggatgccgatctggccctggcgctgacc
ctcaatgcgcgtcagctgctgcgcgacgagccgctcaagctgctgctgatgtcggcgacg
ctggagggccagcgcctgtcggcgttgctcgacgaggcaccggtggtgcgcagcgagggg
cgcatgcacccggtggagcagcgctggggccgcccgctggcgccgggcgagcgcatcgag
ccgcgggtggtgcagacggtgctgcaggcgctgcaggacgagcgcggcagcgtgctggtg
ttcctccccgggcaggcggagatccgtcgggtgaacgaggcgctggccgagcagctggag
gggcgcggcgacatcctgctctgcccgctgcatggcgaactggagctggcccagcagcgt
gcggccatcgagcctgcaccggcgggcctgcgcaaggtggtgctggcgaccaatatcgcc
gagaccagtctgaccatcgaaggtgtacgggtagtggtggacgccgggctggcgcgggtg
ccgcgcttcgatcccggcagtggcatgacccgcctggaaacccggcgcatctcccgcgcc
tcggccacgcaacgggcggggcgggccgggcggctggagccgggcgcctgctaccggctg
tggtcggaggagcagcacgggcagctggcggcctacggtgaggcggaaattctccaggcg
gaccttgccggcgtcgcgctgcagctagcgcgctggggcgtcgagcccgacgagctggcc
tggctcgatcgtccgccggccgccgcctacggtcaggcgcaggccctgctggagcgcctc
ggtgcgctgcagcgcagcgagcacggcggctggcagctgacccgtcacggccaggcgatg
gccgagctgccggtgcatccgcgcctggcgcacatgctgctgcgcgggcaggcgttgggc
gtggctgccttggctgccgacgtggcggcgctgctggtcgagcgtgacattcaatccggc
gggcagcgcggcggcggagccgatctcgccctgcggctgcatcagttgcaggatggtcgt
ggtgctggggtacagcgcgtccggcaactggcccggcagtttcgcagcttgctgcgcgct
gccgcggcggcgccggctgctgaactcgatgagcaacacgcgctggccgcgctgctggcc
ttcgcctatccggaccgggtggcccgccagcgccgcgagggcggcggtggctatcggctg
gccaacggccgcgcggcgcagttcggcgagccggacccgcttatgaaggaatcctggttg
gtgatcgccgagctgggcagtcaccagggccagcgcgaggagcgcatctatcgcgccgtg
gcgctggacccggccttgttcgagagcgcgctggccgagcaggtcgccgtgcgtgacgag
ctggagtgggacgagcgcgagggcgtgctgcgtgccgagcggcagcggcgggtcggcgag
ctggtgctcagtcgcgaaccgctgccgacgctggacgaagaagcacgtggcaaggcgctg
ctcgctctggtgcggcgcaaggggttggaactgctggcctggacgccggagctgcgccag
tggcaggcgcgcattggcctgctgcgccagctcgagctggatgcgggcgataccagcgac
tggccggatgtcagcgacgccgcactgctggcacgcctggaggactggctgctgccttat
ctgggcaaggtcacgcggctggcgcacttcgcccagctcgatctcgccgcgatgctcgcc
accctgctgccctggccgctgccgcagcgcctggaggagcaggcaccggtggccgtcacg
gtgccctccggctcgcgcatccggctggactacagcgagcagccgccggtgctggcggtg
cgcctgcaggagctgttcggcctggccgacacgccgcgtatcgccgctggccggcaggtc
gtcaagctgcacctactgtcgccggcgcgccggccggtacaggtcacccaggacctggcg
agcttctgggccaatacctatgccgaggtgaagaaggatctgaaggggcgctatcccaag
cattactggccggacgatccgctgatcgccgagcccaccgccagggccaagccccgcggg
caatga
DBGET
integrated database retrieval system
