Stutzerimonas stutzeri A1501: PST_4007
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Entry
PST_4007 CDS
T00511
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PST_4007 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_4007 (mutM)
Enzymes [BR:
psa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PST_4007 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PST_4007 (mutM)
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PST_4007 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
ABP81630
UniProt:
A4VRM9
LinkDB
All DBs
Position
complement(4345341..4346153)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIEPHLVGQRVSRVLVRDRRLRWPIPEDLDVRLSGQRIEAVERRAKYL
LIRAESGTLIVHLGMSGSLRLVDAASPAAKHEHVDILLESGQALRYTDPRRFGAMLWSDE
PLAHVLLASLGPEPLGEDFDGDRLYRLSRGRSMAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRPAGSISRARYLKLGEEIRRILAMAIERGGTTLRDFVGGDGKPGYFQQELFVYGR
GGEFCKSCGSTLREIRLGQRASVYCSRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaaaccacccgccgtggcatcgagccgcatctggtcggc
cagcgcgtcagccgcgtgctggtgcgtgaccggcgcctgcgctggccgattccggaagat
ctcgacgtgcgtctgtccggccagcgcatcgaggccgtcgagcggcgcgccaagtacctg
ctgatccgcgccgagagcggcacgctgatcgtccatctcggcatgtccggcagcctgcgt
ctggtggatgcggcatcgcccgcggccaagcatgagcacgtcgacatcctgctggagtcc
ggtcaggccctgcgctacaccgatccgcggcgcttcggcgcgatgctctggagcgacgag
ccgctggcgcatgtactgctggccagcctcgggcccgagccgctgggcgaggacttcgat
ggcgaccggctgtatcggctgtcgcgcgggcgcagcatggcggtcaagccgttcatcatg
gacaacgcggtggtggtgggcgtcggcaacatctacgcgagcgaggcgctgtttgccgcc
gggatcgacccgcgacggccggccgggagtatctcgcgggcgcgttatctcaagctcggc
gaggagatccggcgcatcctggccatggccatcgagcgcggcggcaccaccttgcgcgac
tttgtcggcggcgatggcaagcccggctatttccagcaggaactgttcgtctatggtcgt
ggtggtgaattctgcaagagctgcggctcgaccctgcgcgagatccgcctgggccagcgg
gccagcgtctactgcagtcgctgccaacgctga
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