Stutzerimonas stutzeri A1501: PST_4033
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Entry
PST_4033 CDS
T00511
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PST_4033 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_4033 (recB)
Enzymes [BR:
psa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PST_4033 (recB)
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PST_4033 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
ResIII
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABP81656
UniProt:
A4VRQ5
LinkDB
All DBs
Position
complement(4375556..4379104)
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AA seq
1182 aa
AA seq
DB search
MKLDLLDSPFDGRSLIEASAGTGKTWTLTALYARLLLERQLSVGQILVVTYTTAATAELR
ERIRARLADLLAVYDGTPSSDDFLNRLHARYPDDASRRRLLLAVHGFDEAAIFTIHGFCQ
RALQDAAFEAGGDFDSELTADDREIIDALLADAWRSELADADPAWARFLAKSRITPQWLR
QRLRSHLGKPYLRVEPQGAPVAADLRPVEAAWQRAAELWKQAGTAWIAELLTHGGLSQST
HKSVKFAPWQAELDAYFADPAVMFDLPEGAAKFGVRALSKACKKGFDAPVCELAQALDEL
ADQVADALPAGKQRLIALQVALLERLNRELPERKAAQRLLAFDDLLNRLDQALQGPVGED
LAASLRATYPLALIDEFQDTDPIQYAIFNRIYAKGRDASLCFVGDPKQAIYAFRGADLAT
YMTAKQQADREPFNLPTNYRSTPELIAALNQLFDHPQPFAQPDLRYPPVGAADKPRASLR
LAEEGEAAPLSLVWLGDDPLGKGDAAQLAASDTARRIAVQLAAAAEGRAGFDKDGGFAPL
KGGDIAVLVANHRQAGMIADELAARGVPSVRRGRDSVWRSEEAGELAAVLAAYAEPGREG
LLRHALATRLLGRSAADLARCQDDQHEWDAEREAAERYHQLWQQQGFMRVFRAWLDEQAV
AERLLARVDGERRLTNLLHLGELLQAESLLRPGLEPLLAWFNAQRGSEGAGEEALLRLES
DAERVQIVTIHTSKGLEYPLVFCPFLWDGKLLGKNQDSARCHDADGQPLLDLGSGELEDN
LERARQEVFAEQLRLAYVALTRARDRLWLHWGPVSLPKAKKDGSLPDEGLHSSALAWLLH
GRELPGEQPLTELGNHLASLNGGSLRLAIERLVATSDGRMACLPLESREASTQGSSRAAP
PEQLAQLNRSLYSAWRIGSFSGLAAGMHMEAPDRDALAMPDAGEPGSGFFAFPRGARAGT
CLHAILEDWARGKGELAQLVEPALKAYGLPLDWRDVATAQLERVLQTDLDGAGLTLASLL
AARRLPELGFTFPVRELDVVRLRALLTDPANGLAAPLREAAARLEFDSLKGFLKGFIDLT
FEHGGRWYIADYKSNWLGPDASYYGGERLLQALAGEHYYLQYLIYLVALRRFLRQRLTDF
RDEQLGGAFYLFLRGMPEAGVYFARPDDALLDGLDRLFEEGR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgacctcctcgactcgcccttcgacggccgctcgctgatcgaagccagcgcc
ggcaccggcaagacctggacgctcaccgcgctctatgcgcgtctgctgctggaacgccag
ctctcggtggggcagattctggtggtcacctacaccaccgccgccaccgccgagctgcgc
gagcgcatccgcgcgcggctggccgatctgctggcggtttatgacggcacgccgagcagc
gatgacttcctcaatcgcctgcacgcccgctatccggacgacgcctcgcggcggcgcctg
ttgctggcggtgcacggcttcgacgaggcggcgatcttcaccatccacggcttctgccag
cgcgccctgcaggacgcggccttcgaggccggcggcgacttcgacagcgagctgaccgcc
gatgaccgcgagatcatcgacgcgctgctcgccgacgcctggcgcagcgagctggccgat
gccgacccggcctgggcacgcttcctggccaagagccggatcactccgcagtggttgcgc
cagcgcctgcgcagtcatctgggcaagccctatctgcgggtcgagccgcagggtgcgccg
gtcgcggccgatctgcgcccggtcgaggcggcctggcagcgggctgccgagttgtggaag
caggcgggcaccgcctggatcgccgagctgctgacgcatggcgggctcagccagagcacg
cacaagagcgtcaagtttgcgccatggcaggcggaactggatgcctattttgccgatccg
gcggtgatgttcgacctgcccgagggcgcggcgaagttcggcgtgcgcgccctgagcaag
gcctgcaagaagggcttcgacgcgccggtgtgcgagctggcccaggccctggacgagctg
gccgatcaggtggccgacgcactgccagcgggcaagcagcggctgatcgccctgcaggtg
gcgctgctcgagcggctcaaccgagagttgcctgaacgcaaggcggcgcagaggctgctg
gccttcgacgacctgctgaatcgtctggatcaggcactgcaaggcccggtcggcgaggac
ctggcggcctcgctgcgcgccacctatccgctggcgctgatcgacgagttccaggacacc
gacccgatccagtacgccatcttcaaccgcatctatgccaagggccgtgatgcctcgctg
tgcttcgtcggtgaccccaagcaggcgatctacgctttccgcggcgcggacctggccact
tacatgacggccaagcagcaggccgatcgcgaacccttcaacctgccgaccaactaccgc
tcgacgcccgagctgatcgccgcgctcaaccagctgttcgaccatccgcagccgttcgcc
caacccgacctgcgctacccaccggtgggtgccgccgacaagccgcgtgcgagcctgcgt
ctggcagaggagggcgaggcggcgccgctgtcgctggtctggctcggcgacgatccgctg
ggcaagggtgacgccgcgcagctggcggccagtgacaccgcgcgacggatcgccgtgcag
ctggccgccgccgccgagggacgcgcaggtttcgacaaggatggcggtttcgccccgctc
aagggcggcgatatcgccgtgctggtggccaatcaccgccaggccgggatgatcgccgac
gagctggccgcgcgtggcgtgcccagcgtgcgccgcgggcgcgacagcgtctggcgcagc
gaggaggccggcgaactggccgcggtgcttgccgcctatgccgagccgggacgcgagggt
ttgctgcggcatgccctggcgacgcgcctgctgggccgcagcgccgccgatctcgcccgc
tgccaggatgaccagcatgaatgggacgccgagcgcgaagccgccgagcgctaccaccag
ctctggcagcagcagggcttcatgcgcgtgttccgcgcctggctcgacgagcaggcggtg
gccgaacgcctgctggcgcgggtggatggcgaacggcggctgaccaacctcttgcacctc
ggtgaattgctgcaggccgagagcctgctgcggcccgggctcgagccgctgctcgcctgg
ttcaacgcccagcgcggcagcgaaggcgccggtgaagaagcgctgctgcgcctggaaagc
gatgccgaacgggtgcagatcgtcaccattcacaccagcaagggtctggaataccccttg
gtgttctgcccgtttctctgggacggcaagctgctcggcaagaaccaggacagtgcccgt
tgtcacgatgccgatggccagccgctgctggacctgggcagcggcgaactggaggacaac
ctcgaacgcgcccgtcaggaggtgttcgccgaacagctgcggctggcctacgtcgccctg
acccgcgcgcgtgaccggctctggctgcattgggggccggtgagcctgcccaaggcgaag
aaggatggcagtctgcccgacgaaggcttgcacagcagcgccctggcctggctgctgcac
ggccgcgaactgccgggcgagcagccactgacggagctgggcaaccacctggctagcctc
aacggcggtagcttgcgtctggccatcgagcggctggtcgccacgagcgacgggcgcatg
gcctgcctgccgctcgagtcgcgtgaggccagcacccagggcagcagccgcgcagcgccg
cccgagcagctggcgcagctcaaccgcagcctctacagcgcctggcgcatcggtagcttc
tccgggctggccgccggcatgcacatggaagcgccggaccgcgacgccctggcgatgccc
gatgccggcgagccgggcagcggcttcttcgccttcccacgcggcgcgcgggccggtacc
tgtctgcatgccatcctcgaggactgggcacggggcaagggcgagctggcccagctggtc
gagccggcgctcaaggcctacggcttgcccctggactggcgggacgtcgccacggctcag
ctggagcgggtgctgcagaccgatctggacggcgccgggttgaccctcgccagcctgctg
gccgcgcgccggctgccggagctgggcttcaccttcccggtgcgcgagctggacgtggtt
cgcctgcgcgccttgctgaccgacccggccaacgggctggccgcaccgctgcgcgaggcc
gcagcgcggcttgaattcgacagcctcaagggctttctcaagggctttatcgacctgacc
ttcgagcacggcggccgctggtacatcgccgactacaagtccaactggctcggcccggac
gccagctactacggcggcgagcggttgctgcaggcgctggcgggcgagcactactacctg
caatacctgatctatctggtggcgctgcgccgcttcctgcgccagcgtctgacagatttt
cgcgatgagcagctgggcggcgccttctacctgttcctgcgcggcatgcccgaggcgggc
gtctacttcgcgcggccggacgatgcgctgctcgatgggctggatcgactgttcgaggag
ggacggtga
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