Stutzerimonas stutzeri A1501: PST_4034
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Entry
PST_4034 CDS
T00511
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PST_4034 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psa03400
]
PST_4034 (recC)
Enzymes [BR:
psa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PST_4034 (recC)
DNA repair and recombination proteins [BR:
psa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PST_4034 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABP81657
UniProt:
A4VRQ6
LinkDB
All DBs
Position
complement(4379768..4383046)
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AA seq
1092 aa
AA seq
DB search
MLSLYHAPDLETLGELATTLLAQPLADPFAPARVVVPSQGMGRWLTLELARRQGIAMQLE
LQLPAAFVWDLSRTVLGSLPEQSAFSPTTLTWRLYGWLCEPANLELAPRLAQYLDGGDER
RRLSLAAKIADVFDQYLLYRDDWLAAWERGETLDLGPDEAWQALLWRELTKDGHPHRARL
LGDLLQRLYRDEPLPDLPERLLVFGISSLPPHHLRVLDGLARHIDVVVCALNPSREAWGE
IRDIRELARQPESGVDDWYLDVGHPLLASLGKQGRDFFDSLFSLTASEGSQEFGLYSEDE
DLHDDSLLHALQNDILRLRTRLPDERISLAENDRSLEVHIAHSPLREVEILHDQLLARFA
ADPALTPDQVVVLTPDIERYAPFIEAVFAPREGSPRIPYSLADRSLRAEVPLIEAFLELL
LLAQSRFAAEEILAWLEQPAIARRAGIESEDLPLLRDWLREAGVRWGRDGEQRARLGLPA
EPAFTWRQGLDRLLLGFAAPPQLAGDRAPLLGEHWPLDALEGARGQLLGRLVGFVERLGS
LADQLARPRPLAEWADDLQVLIDTLFDEREAGETLLLLSQACAALRDQAQAADLTRPIEL
ELVHQQLSAALQQGGGASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGF
DLIGRHPRRGDRARRLDDRYLLLETLLSARQALYLSYVGRDPRDNAVLPPSVLLSEVLEA
VDMTAVLADGARPVSQKILIAHPLQPFSPRNFGEAPCAGYSLPWFRAAQRLAEPPQAQAQ
PFASLLAEPDEAWLTIEPSQLLQCFRHPARFLLEQRLGLRLADDQESLASDEPFDLEMPA
WNGLRRLSLQAMEQRWSDEEERRMACAAGWLPTGELGQALWGKLRGPVRAFAPRLFELRP
DAVPEPLPVDINLAGVRVHGWLDGVTPGGLFGWKLGRLGEWDLPPFWLRHLLLNLCATPG
IERHSLMLSPAGDWQLGPLANAAELLEPWLVAYRSAIREPLPLLPRSSQAFARGYRKPSR
GSEPLDCARKRAREAWFGAEFSPIAAEAEDPWNALAFRDSDPLDERFETLAEQLIGPALD
ALADGEEQSDDV
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctctaccacgcccctgatctcgaaaccctcggcgaactggccaccacgctg
ctcgcccagccgctggccgaccccttcgcgccggcgcgggtggtggtgccgagccagggc
atgggccgctggctgaccctggagctggcgcgccggcagggcatcgccatgcagctcgag
ctgcagctgccggcggccttcgtctgggacctgagccgcacggtgctgggcagcctgccc
gagcagtcggcgttctccccgaccaccctgacctggcgcctctacggctggctgtgcgag
ccggccaatctcgagctggcgccgcgtttggcgcagtacctcgatggcggcgatgagcgc
cggcggctgtcattggcggccaagatcgccgacgtcttcgaccagtacctgctctatcgc
gacgactggctggcggcctgggagcgcggcgaaaccctcgacctcggtcccgacgaagcc
tggcaggcgctgctctggcgcgaactgaccaaggacggccacccgcaccgcgcgcgcctg
ctcggcgacctgctgcagcgcctgtaccgcgacgagccgttgccggacctccccgagcgc
ctgctggtgttcggcatcagcagcctgccgccgcaccatcttcgtgtgctcgacggcctg
gcgcggcatatcgacgtggtggtctgcgcgctcaacccaagccgcgaagcctggggcgag
attcgcgatattcgcgagctggccaggcaaccggaaagcggtgtcgatgactggtatctg
gacgtcggccatccgctactggcgagtctcggcaagcagggtcgcgactttttcgactcg
ctgttcagcctgaccgccagcgaaggcagtcaggaattcggcctgtattccgaagacgag
gacctgcacgacgacagcctgctgcatgccttgcagaacgacatcctgcgcctgcgcacc
cgcctgcccgatgagcgcatcagcctggccgagaacgaccgttcgctggaggtgcatatc
gcccactcgccgctgcgcgaggtggaaatcctccacgaccagctgctggcgcgcttcgcc
gccgacccggcgctgacgccggatcaggtggtggtgctgacccccgacatcgaacgttat
gcgcctttcatcgaggcggtgttcgccccgcgcgagggcagcccgcggattccctacagc
ctcgccgaccgcagcctgcgcgccgaggtaccgttgatcgaggcctttctcgaactgctg
ttgctggcgcagagccgtttcgcggccgaggaaatcctcgcctggctggaacagccggcc
atcgcccgccgcgccggcatcgaaagcgaagacctgccgctgctgcgtgactggctgcgc
gaggccggcgtgcgctggggccgcgatggcgagcagcgcgcacggctgggcctgccggcc
gaaccggcctttacctggcgccaggggctggaccgcctgctgctgggcttcgctgcaccg
ccgcagctggccggcgaccgcgcgcccttgcttggcgagcactggccgctggacgcgctg
gaaggcgcgcgcgggcagttgctcgggcgattggtgggcttcgtcgagcggctcggcagc
ctagccgatcaactggctcggccgcgcccgctggccgagtgggcggatgacctgcaagtg
ctgatcgatacgctgttcgacgagcgcgaggccggcgagacgctgctgctgctctcccag
gcctgcgccgccctgcgcgatcaggcccaggccgccgacctcacccggcccatcgagctg
gaactggtgcaccagcagctcagtgccgcgttgcagcagggcggcggcgcctcgggcttt
ctcaccggtgcggtgaccttctgcaccatggtgccgatgcgcagcctgccgttccgcgtg
gtctgcctgctcggcctggacgatggcgccttcccgcggcgcacgccgccgtcgggcttc
gacctgatcggccgacatccgcgccgtggcgaccgggcgcggcgcctcgacgaccgctac
ctgctgctggagacgctgctctcggcgcgtcaggcgctgtacctgtcctatgtcggccgc
gacccgcgcgacaacgccgtgctgccgccctcggtgttgctcagcgaggtgctggaggcg
gtggacatgaccgccgtgctggccgacggggcgcggccggtcagccagaagatcctcatc
gcgcatccgctgcagccgttctcgccgcgtaatttcggcgaagcgccctgtgccggctat
tcgctgccctggttccgcgccgcccagcgcctggccgagccaccacaggcgcaggcgcaa
cccttcgccagcctgctcgccgaacccgatgaggcctggctgaccatcgagccgtcgcag
ctgctgcagtgcttccgccacccggcgcgcttcctgctcgaacagcgcctcggtctgcgc
ctggccgatgatcaggaatcgcttgccagcgacgaaccgttcgacctggaaatgccggcc
tggaacggcctgcgccgcctgtcgctgcaagcgatggagcagcgctggagcgacgaggag
gagcggcgcatggcctgcgcggcgggctggctgcccaccggtgagctgggccaggcgctg
tggggcaaactgcgcggaccggtgcgtgcatttgcaccgcggctgttcgaactgcgcccg
gacgccgtgcccgagccgctgccggtggacatcaacctggccggcgtgcgcgtgcatggc
tggcttgatggcgtgacgccgggcgggctgttcggctggaagctcggccgcctcggcgaa
tgggatctgccgccgttctggctgcgccacctgctgctcaacctgtgcgccacgcccggc
atcgaacgccacagcctgatgctttcgccggccggtgactggcagctggggccgctggcc
aatgcggccgagctgctggagccctggctggtggcctaccgcagcgcgatccgcgagcca
ctgccgctgttgccgcgcagcagccaggcgttcgcccgcggctaccgcaagccgagccgc
ggcagcgagccgctggactgcgcccgcaagcgcgcccgcgaagcctggttcggcgccgaa
ttcagccccattgccgccgaagccgaagacccctggaacgccttggccttccgcgacagc
gatccgctggacgagcgtttcgaaaccctggccgaacagctgatcggcccggcgttggat
gcgttggcggatggagaggagcagagtgatgacgtctga
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