Stutzerimonas stutzeri A1501: PST_4176
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Entry
PST_4176 CDS
T00511
Name
(GenBank) probable sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psa
Stutzerimonas stutzeri A1501
Pathway
psa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PST_4176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psa03021
]
PST_4176
Transcription machinery [BR:
psa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PST_4176
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_28
HTH_11
Sigma70_ECF
GerE
PhyR_sigma-like
HTH_Mga
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ABP81798
UniProt:
A4VS47
LinkDB
All DBs
Position
complement(4531200..4531715)
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AA seq
171 aa
AA seq
DB search
MATEGMLRQQMLHRFYADHHGWLNGWLRRQLGCSQRAADLAQDTFVRVLSKDDDMAAIRE
PRAYLHTIAKGLLINHWRRRQIEQAYLDALALQPEPVAPSPESQALIVETLLRIDAMLAQ
LPTRVRSAFLMSQLHGMTYAAIATELGVSERMVKKYMAQAMLHCLMLVAED
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaaggtatgcttcggcagcagatgctgcatcggttctacgctgatcaccac
ggctggttgaatggctggctgcgccgtcagctcggctgtagtcagcgtgcggccgacctc
gcgcaggacaccttcgtgcgggtgctgagcaaggacgacgacatggctgcgatccgcgaa
ccccgggcctatctgcacaccatcgccaagggcctgttgatcaaccattggcgccgccgg
cagatcgagcaggcctatctggatgcattggcactgcaaccggagccggtggcaccgtca
ccggagtcccaggcgctgattgtcgaaaccctgctgcggatcgatgccatgctggcgcag
ctgcccaccagggtgcgcagcgctttcctcatgtcgcagctgcacggcatgacctacgcg
gctatcgccaccgaactgggtgtatccgagcgcatggtgaagaagtacatggcgcaggcc
atgctgcattgcctgatgctggtagcggaggactga
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